Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 RNA5SP208-201ENST00000516156 78 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 Y_RNA.665-201ENST00000516177 98 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 RNU1-95P-201ENST00000516357 160 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 RNU1-128P-201ENST00000516704 160 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 RNU6-273P-201ENST00000516937 96 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.94□□□□□ -1.94
DUX3Q96PT4 AC093331.1-201ENST00000521474 169 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 AC022690.1-201ENST00000526681 550 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.94□□□□□ -1.94
DUX3Q96PT4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.94□□□□□ -1.94
DUX3Q96PT4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.94□□□□□ -1.94
DUX3Q96PT4 MIR4742-201ENST00000581069 85 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 VN1R80P-201ENST00000597126 338 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.94□□□□□ -1.94
DUX3Q96PT4 SNORA51-201ENST00000606420 132 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 AC004908.2-201ENST00000609090 574 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 AC006023.2-201ENST00000609916 167 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
DUX3Q96PT4 MIR1302-1-201ENST00000637932 143 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC2.94□□□□□ -1.94
DUX3Q96PT4 MTND4P14-201ENST00000435799 1354 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
DUX3Q96PT4 PRO1804-201ENST00000623780 2050 ntBASIC2.94□□□□□ -1.94
DUX3Q96PT4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
DUX3Q96PT4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
DUX3Q96PT4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
DUX3Q96PT4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
DUX3Q96PT4 TAB3P1-202ENST00000452645 1634 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
DUX3Q96PT4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
DUX3Q96PT4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 RNU6-1249P-201ENST00000363237 111 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 Y_RNA.378-201ENST00000365652 113 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
DUX3Q96PT4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
DUX3Q96PT4 XGY1-201ENST00000381172 446 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 SNORA5A-201ENST00000384111 134 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 RNU6-432P-201ENST00000384196 109 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 Y_RNA.576-201ENST00000384781 102 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 SNORA48.8-201ENST00000391324 134 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 RPL21P17-201ENST00000397467 475 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AL136372.1-201ENST00000403060 228 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AL356057.2-201ENST00000403318 432 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 RNA5SP118-201ENST00000410385 109 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 RNU4-14P-201ENST00000410858 122 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AC093578.1-201ENST00000415219 368 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 CRYBB2P1-203ENST00000415709 538 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AC079780.1-201ENST00000428259 207 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AC083863.1-201ENST00000438811 231 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 PRPS1P1-201ENST00000445305 876 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AL590399.6-201ENST00000446396 307 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 MTND1P9-201ENST00000453775 944 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 RNU6-329P-201ENST00000459618 107 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 RPL21P104-201ENST00000464143 478 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 AC012181.1-201ENST00000479895 423 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 RPL23AP55-201ENST00000498163 452 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 FGF7P4-201ENST00000509595 295 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AC010265.1-201ENST00000513509 211 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 RNU4-29P-201ENST00000515943 174 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 RNU7-51P-201ENST00000516560 62 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 RPL7P20-201ENST00000520308 745 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 AC037471.2-201ENST00000564941 598 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 MIR4444-1-201ENST00000581696 74 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 MIR4444-2-201ENST00000584390 74 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 BNIP3P22-201ENST00000593399 556 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 SNRPGP15-201ENST00000600149 222 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 XIAPP1-201ENST00000603162 600 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 AC013553.2-201ENST00000604244 589 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 AC119674.1-207ENST00000641355 633 ntBASIC2.93□□□□□ -1.94
DUX3Q96PT4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
DUX3Q96PT4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
DUX3Q96PT4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
DUX3Q96PT4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
DUX3Q96PT4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
DUX3Q96PT4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
DUX3Q96PT4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
DUX3Q96PT4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.92□□□□□ -1.94
DUX3Q96PT4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
DUX3Q96PT4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
DUX3Q96PT4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
DUX3Q96PT4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
DUX3Q96PT4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
DUX3Q96PT4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
DUX3Q96PT4 MTND4P23-201ENST00000447723 1363 ntBASIC2.92□□□□□ -1.94
DUX3Q96PT4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms