Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.71□□□□□ -2.3
CFAP54Q96N23 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CFAP54Q96N23 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.71□□□□□ -2.3
CFAP54Q96N23 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.71□□□□□ -2.3
CFAP54Q96N23 MRPS17P9-201ENST00000511924 393 ntBASIC0.7□□□□□ -2.3
CFAP54Q96N23 AC091965.2-201ENST00000512324 613 ntBASIC0.7□□□□□ -2.3
CFAP54Q96N23 AC084373.1-201ENST00000603311 235 ntBASIC0.7□□□□□ -2.3
CFAP54Q96N23 AL078605.1-201ENST00000603529 500 ntBASIC0.7□□□□□ -2.3
CFAP54Q96N23 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CFAP54Q96N23 AL137003.2-201ENST00000606924 2538 ntBASIC0.7□□□□□ -2.3
CFAP54Q96N23 VN1R42P-201ENST00000424651 344 ntBASIC0.7□□□□□ -2.3
CFAP54Q96N23 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.7□□□□□ -2.3
CFAP54Q96N23 AC243772.1-201ENST00000451620 410 ntBASIC0.7□□□□□ -2.3
CFAP54Q96N23 AC117503.1-201ENST00000472241 394 ntBASIC0.7□□□□□ -2.3
CFAP54Q96N23 RNU6-229P-201ENST00000516614 102 ntBASIC0.7□□□□□ -2.3
CFAP54Q96N23 SUB1P1-201ENST00000524415 382 ntBASIC0.7□□□□□ -2.3
CFAP54Q96N23 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.7□□□□□ -2.3
CFAP54Q96N23 AL118508.4-201ENST00000624142 1176 ntBASIC0.7□□□□□ -2.3
CFAP54Q96N23 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.7□□□□□ -2.3
CFAP54Q96N23 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.7□□□□□ -2.3
CFAP54Q96N23 RNU6-1164P-201ENST00000364428 107 ntBASIC0.69□□□□□ -2.3
CFAP54Q96N23 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0.69□□□□□ -2.3
CFAP54Q96N23 AP003327.1-201ENST00000529684 127 ntBASIC0.69□□□□□ -2.3
CFAP54Q96N23 AC091932.3-201ENST00000624223 323 ntBASIC0.69□□□□□ -2.3
CFAP54Q96N23 AC007785.2-201ENST00000598627 1916 ntBASIC0.69□□□□□ -2.3
CFAP54Q96N23 RNA5SP299-201ENST00000391203 116 ntBASIC0.69□□□□□ -2.3
CFAP54Q96N23 PTGES3P2-201ENST00000407942 482 ntBASIC0.69□□□□□ -2.3
CFAP54Q96N23 RPL7P31-201ENST00000450192 724 ntBASIC0.69□□□□□ -2.3
CFAP54Q96N23 HMGN2P13-201ENST00000476476 274 ntBASIC0.69□□□□□ -2.3
CFAP54Q96N23 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CFAP54Q96N23 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CFAP54Q96N23 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CFAP54Q96N23 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CFAP54Q96N23 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.69□□□□□ -2.3
CFAP54Q96N23 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.69□□□□□ -2.3
CFAP54Q96N23 MIR4716-201ENST00000579628 84 ntBASIC0.69□□□□□ -2.3
CFAP54Q96N23 MIR5194-201ENST00000582634 120 ntBASIC0.69□□□□□ -2.3
CFAP54Q96N23 AC090425.2-201ENST00000608818 501 ntBASIC0.69□□□□□ -2.3
CFAP54Q96N23 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CFAP54Q96N23 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CFAP54Q96N23 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.69□□□□□ -2.3
CFAP54Q96N23 AL163153.1-201ENST00000554223 283 ntBASIC0.68□□□□□ -2.3
CFAP54Q96N23 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.68□□□□□ -2.3
CFAP54Q96N23 AC009812.4-201ENST00000569134 1805 ntBASIC0.68□□□□□ -2.3
CFAP54Q96N23 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CFAP54Q96N23 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
CFAP54Q96N23 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.68□□□□□ -2.3
CFAP54Q96N23 RNU6-758P-201ENST00000516292 89 ntBASIC0.68□□□□□ -2.3
CFAP54Q96N23 IGLVI-20-201ENST00000519296 130 ntBASIC0.68□□□□□ -2.3
CFAP54Q96N23 RNU4-72P-201ENST00000410754 173 ntBASIC0.68□□□□□ -2.3
CFAP54Q96N23 RFESDP1-201ENST00000422350 461 ntBASIC0.68□□□□□ -2.3
CFAP54Q96N23 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.68□□□□□ -2.3
CFAP54Q96N23 AC098591.2-201ENST00000510152 315 ntBASIC0.68□□□□□ -2.3
CFAP54Q96N23 SNORA46.1-201ENST00000391069 153 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 FO393413.1-201ENST00000402892 195 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.67□□□□□ -2.3
CFAP54Q96N23 AC118469.1-201ENST00000442943 488 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 C1DP3-201ENST00000455013 423 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.67□□□□□ -2.3
CFAP54Q96N23 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.67□□□□□ -2.3
CFAP54Q96N23 AC022662.1-201ENST00000580252 331 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.67□□□□□ -2.3
CFAP54Q96N23 AC009090.3-201ENST00000616553 565 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 XKRY2-202ENST00000623874 1581 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 XKRY-202ENST00000624960 1581 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 RNA5SP63-201ENST00000391225 112 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.67□□□□□ -2.3
CFAP54Q96N23 RAB9AP5-201ENST00000437794 597 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.67□□□□□ -2.3
CFAP54Q96N23 RAB9AP2-201ENST00000443911 597 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 PTENP1-201ENST00000447117 1215 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 SUMO2P2-201ENST00000456482 255 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.67□□□□□ -2.3
CFAP54Q96N23 HMGB1P46-201ENST00000520062 610 ntBASIC0.67□□□□□ -2.3
CFAP54Q96N23 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CFAP54Q96N23 CISD1P1-201ENST00000393907 327 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 RPL23AP47-201ENST00000408017 460 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.66□□□□□ -2.3
CFAP54Q96N23 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.66□□□□□ -2.3
CFAP54Q96N23 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.66□□□□□ -2.3
CFAP54Q96N23 AL138976.2-201ENST00000563989 694 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 AL139344.1-201ENST00000605228 195 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 AC006001.4-201ENST00000622243 395 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 SNORA63.3-201ENST00000362682 132 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 Y_RNA.572-201ENST00000384757 98 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 SNRPEP4-201ENST00000435815 279 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 SNORD108-201ENST00000459332 71 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 TRBVB-201ENST00000477100 408 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.66□□□□□ -2.3
CFAP54Q96N23 AC023932.2-201ENST00000603176 175 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 AP000654.2-201ENST00000605633 586 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
CFAP54Q96N23 AC092648.1-201ENST00000425870 423 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 AC010285.1-201ENST00000470580 392 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 AC105252.1-201ENST00000503089 286 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.66□□□□□ -2.3
CFAP54Q96N23 OR5B19P-201ENST00000531766 928 ntBASIC0.66□□□□□ -2.3
CFAP54Q96N23 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 RNU6-799P-201ENST00000363567 107 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms