Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 BRDTP1-201ENST00000605735 677 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 AC008945.2-201ENST00000606056 604 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 DUSP12P1-201ENST00000612874 516 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 CEP170P1-201ENST00000502249 4587 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 AC233263.6-201ENST00000631132 1963 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC138Q96M89 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC138Q96M89 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC138Q96M89 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC138Q96M89 Y_RNA.372-201ENST00000365599 102 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 MIR30B-201ENST00000384850 88 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 RNA5SP252-201ENST00000391131 119 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 MIR888-201ENST00000401186 77 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 RNU2-29P-201ENST00000410423 189 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 USP9YP6-201ENST00000413550 854 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 OR6C66P-201ENST00000414917 930 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 AC068533.1-201ENST00000418542 415 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 AL160275.3-201ENST00000423876 471 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 FDX1P2-201ENST00000450769 375 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 AC083798.1-201ENST00000472671 131 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 RPL36AP51-201ENST00000487216 318 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 AC117522.3-201ENST00000507974 584 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 SNORD59.2-201ENST00000516873 68 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 SCARNA14-201ENST00000516903 136 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 RNU6-1315P-201ENST00000517187 99 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 AC022695.1-201ENST00000522089 237 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 AC025678.1-201ENST00000567861 338 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 MIR4703-201ENST00000577728 79 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 AL138889.2-201ENST00000603883 242 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 AC007621.1-201ENST00000604544 437 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 AL354950.2-201ENST00000617939 290 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 AL354798.1-201ENST00000622505 329 ntBASIC3.7□□□□□ -1.82
CCDC138Q96M89 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC138Q96M89 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC138Q96M89 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC138Q96M89 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC138Q96M89 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC138Q96M89 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC138Q96M89 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC138Q96M89 MTND4P5-201ENST00000435821 1374 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 RNU6-996P-201ENST00000365438 107 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 Y_RNA.381-201ENST00000365666 102 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 RNU6-517P-201ENST00000384362 110 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 RPL32P23-201ENST00000397237 405 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 RPL7P46-201ENST00000425129 740 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 RPS3AP44-201ENST00000425466 790 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 Z99127.3-201ENST00000448158 395 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 RPL21P8-201ENST00000465083 535 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 AC034236.1-201ENST00000469891 373 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 AC126182.1-201ENST00000478134 357 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 AL163973.1-201ENST00000484753 577 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 SUMO2P6-201ENST00000505273 288 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 RAC1P2-201ENST00000511164 579 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 SNORA40.12-201ENST00000516329 111 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 RN7SKP209-201ENST00000516888 304 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 AP003122.3-201ENST00000526316 255 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 AC084851.1-201ENST00000529105 249 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 MIR1273C-201ENST00000578669 77 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 MTATP6P3-201ENST00000581686 676 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 AL109618.2-201ENST00000605527 211 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 SNORA62.6-201ENST00000606322 83 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 AC099778.2-201ENST00000610904 211 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CCDC138Q96M89 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC138Q96M89 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC138Q96M89 AC093908.1-201ENST00000623125 8092 ntBASIC3.69□□□□□ -1.82
CCDC138Q96M89 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC004972.1-201ENST00000623934 2209 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms