Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 GNG5P1-201ENST00000255500 204 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 RNU5E-1-201ENST00000362477 120 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 SNORA26.8-201ENST00000391306 124 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 AL122016.1-201ENST00000403365 367 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 RNA5SP274-201ENST00000410484 108 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 RNU2-49P-201ENST00000410666 184 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 AC104332.2-201ENST00000429959 156 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 MTND6P13-201ENST00000443510 523 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 ST13P20-201ENST00000447996 1065 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 MTND3P7-201ENST00000474435 343 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 AC007182.2-201ENST00000489251 402 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 MRPS36P2-201ENST00000512569 299 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 GLYCAM1-201ENST00000546596 285 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 AC024220.1-201ENST00000603675 484 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 AL137843.1-201ENST00000605078 385 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 AC069234.5-201ENST00000611056 416 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 AC091304.9-201ENST00000612091 226 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 AC026241.1-201ENST00000517873 2142 ntBASIC2.96□□□□□ -1.93
VPS33AQ96AX1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
VPS33AQ96AX1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 NACAP2-201ENST00000318548 624 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 RNU6-288P-201ENST00000363690 104 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 RNA5SP50-201ENST00000363731 107 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 RNU6-946P-201ENST00000383878 107 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 MIR554-201ENST00000384874 96 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 MIR301A-201ENST00000385261 86 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 HMGN1P14-201ENST00000412459 517 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 NPM1P11-201ENST00000417106 855 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 ELOCP4-201ENST00000420090 333 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AL353729.1-201ENST00000425044 720 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AL592045.1-201ENST00000429867 352 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AL591704.1-201ENST00000432574 275 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AL591212.2-201ENST00000433923 257 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 RPL36AP6-201ENST00000435770 321 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 ELOCP23-201ENST00000452014 332 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 RN7SL20P-201ENST00000488827 297 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AC105252.1-201ENST00000503089 286 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AP003122.3-201ENST00000526316 255 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AC084851.1-201ENST00000529105 249 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 MIR3682-201ENST00000581338 84 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AC015871.2-201ENST00000603605 948 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AC068276.1-201ENST00000605793 379 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AC011939.3-201ENST00000613686 466 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AL355365.1-201ENST00000616480 294 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 AL603839.4-201ENST00000624658 1005 ntBASIC2.96□□□□□ -1.94
VPS33AQ96AX1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS33AQ96AX1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 RNU6-188P-201ENST00000364207 107 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 RNU1-33P-201ENST00000364249 162 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 SNORA68.1-201ENST00000364537 132 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 RN7SKP226-201ENST00000364912 300 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 RNU6-190P-201ENST00000384154 102 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 Y_RNA.534-201ENST00000384599 112 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 AL513475.1-201ENST00000406602 315 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 RPS3AP3-201ENST00000411933 242 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 AC093106.2-201ENST00000428212 385 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 RPS24P1-201ENST00000438550 371 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 RNA5SP269-201ENST00000459032 137 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms