Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RNU6-790P-201ENST00000384479 105 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 Y_RNA.577-201ENST00000384794 101 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AP000580.1-201ENST00000404439 358 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AL138885.1-201ENST00000405921 675 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 RNU6-1156P-201ENST00000410365 100 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 RNU6-325P-201ENST00000411132 105 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AC006946.1-201ENST00000429106 328 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AL591473.1-201ENST00000464297 313 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AC011276.1-201ENST00000469688 323 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 RNU1-86P-201ENST00000516108 154 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 Y_RNA.680-201ENST00000516441 93 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 RNU1-107P-201ENST00000516617 154 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 CYCSP40-201ENST00000575927 294 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AC016727.2-201ENST00000603988 621 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AC123912.5-201ENST00000605470 343 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 MIR6716-201ENST00000613413 80 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AC034102.8-201ENST00000615146 484 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AP005019.3-201ENST00000620418 560 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 AC011944.2-201ENST00000624440 683 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 Z99571.1-201ENST00000636677 394 ntBASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VTI1AQ96AJ9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 Y_RNA.222-201ENST00000364264 102 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 Y_RNA.324-201ENST00000365165 102 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 RNA5SP397-201ENST00000391323 118 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AC079780.1-201ENST00000428259 207 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 RPS17P8-201ENST00000434525 335 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 DAP3P1-201ENST00000441522 278 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 TDGF1P1-201ENST00000445734 527 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 NDUFS5P3-201ENST00000450668 321 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 NUTF2P7-201ENST00000453086 375 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AC022493.1-201ENST00000492984 337 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AC023141.12-201ENST00000512399 199 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 APOOP4-201ENST00000513530 597 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 RN7SKP21-201ENST00000516503 220 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 SNORA40.14-201ENST00000516543 86 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 RNA5SP471-201ENST00000516971 106 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AC007991.1-201ENST00000522680 631 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AC040926.1-201ENST00000530195 238 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AC023157.2-201ENST00000540596 141 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AL121603.1-201ENST00000553815 142 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 MIR5699-201ENST00000578903 90 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 SNORD91B-202ENST00000608459 222 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AL591516.1-201ENST00000611326 274 ntBASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.32□□□□□ -1.56
VTI1AQ96AJ9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 AC116096.1-201ENST00000566804 2314 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 UBE2L2-201ENST00000254302 429 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 SNORA71.2-201ENST00000364941 134 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 RN7SKP267-201ENST00000410381 285 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 RPS15AP6-201ENST00000420703 385 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 HSPD1P21-201ENST00000436541 245 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 FO393415.2-201ENST00000480085 343 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 AC008716.1-201ENST00000511084 513 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 AC007016.1-201ENST00000512110 244 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 RNU6-927P-201ENST00000516199 100 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 RNU2-53P-201ENST00000516257 147 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 AP001781.1-201ENST00000530977 207 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 TRAV32-201ENST00000553993 340 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 AC125232.2-201ENST00000592457 143 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 AC078899.3-201ENST00000599065 212 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 AL512643.1-201ENST00000635735 524 ntBASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms