Protein–RNA interactions for Protein: Q969Q1

TRIM63, E3 ubiquitin-protein ligase TRIM63, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM63Q969Q1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.35□□□□□ -1.87
TRIM63Q969Q1 LINC00933-203ENST00000559812 219 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM63Q969Q1 AC025627.2-201ENST00000576220 160 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 MIR5583-1-201ENST00000580941 59 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 AC005498.1-201ENST00000592125 465 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 AC008945.2-201ENST00000606056 604 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM63Q969Q1 AC022467.1-201ENST00000614738 749 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 AC010378.1-201ENST00000619270 362 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 MIR6886-201ENST00000619864 61 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 AC139792.3-201ENST00000623525 224 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 AC005609.4-201ENST00000625071 447 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM63Q969Q1 AC068137.4-201ENST00000638485 296 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
TRIM63Q969Q1 AC004972.1-201ENST00000623934 2209 ntBASIC3.35□□□□□ -1.87
TRIM63Q969Q1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM63Q969Q1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM63Q969Q1 CDC27P3-201ENST00000635418 1910 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC092435.3-201ENST00000565538 3654 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 SNORD14B-201ENST00000364533 90 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 RNU6-715P-201ENST00000365204 103 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 RNU6-903P-201ENST00000391270 109 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 RN7SKP213-201ENST00000410746 298 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 RNA5SP31-201ENST00000411144 127 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 RAB28P1-201ENST00000411517 641 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC016769.2-201ENST00000414815 475 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AL158071.1-201ENST00000430315 461 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 TPT1P12-201ENST00000448968 492 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC003071.1-201ENST00000451219 789 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC084198.1-201ENST00000477747 402 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 RPL35P6-201ENST00000490024 372 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC110768.1-201ENST00000509222 400 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC068657.1-201ENST00000520807 306 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC091152.3-201ENST00000604227 325 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC092954.2-201ENST00000609103 430 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC087241.4-201ENST00000612441 480 ntBASIC3.34□□□□□ -1.87
TRIM63Q969Q1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM63Q969Q1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM63Q969Q1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AL139276.1-201ENST00000311910 1001 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 RNU6-552P-201ENST00000362869 119 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 MTCO3P40-201ENST00000392516 676 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 BX323014.1-201ENST00000412876 237 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 HMGB3P20-201ENST00000417997 600 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AL358075.3-201ENST00000426289 226 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 BX679664.1-201ENST00000434429 253 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AL161651.1-201ENST00000440882 223 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AC073415.1-201ENST00000449240 153 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 RNU7-63P-201ENST00000459054 62 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 snoU109.2-201ENST00000459316 135 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 RN7SL98P-201ENST00000462271 300 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 RN7SL629P-201ENST00000489622 285 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AC026801.1-201ENST00000497178 464 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 SNORA31.6-201ENST00000516241 130 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 BNIP3P30-201ENST00000601184 574 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AF250324.2-201ENST00000608299 610 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AC139792.2-201ENST00000624218 587 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AL354685.2-201ENST00000448218 1447 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM63Q969Q1 AC006020.1-201ENST00000420179 1854 ntBASIC3.33□□□□□ -1.88
TRIM63Q969Q1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM63Q969Q1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms