Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ZYG11AP1-201ENST00000430329 837 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 UBE2D3P1-201ENST00000436669 444 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 MTND4P6-201ENST00000438297 472 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AL118520.1-201ENST00000450770 291 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 PMCHL2-203ENST00000457791 237 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 RNU6-717P-201ENST00000459076 104 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 RNU6-1225P-201ENST00000516336 65 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AP003122.3-201ENST00000526316 255 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 MIR4529-201ENST00000578110 78 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AC105245.1-201ENST00000581934 244 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 MIR4298-201ENST00000584380 73 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AC002984.1-201ENST00000591692 448 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AL391813.1-201ENST00000603098 260 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 APOOP1-201ENST00000604695 592 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AL627230.6-201ENST00000611129 280 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 U4atac.1-201ENST00000618345 95 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AC011477.1-204ENST00000623416 1325 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AL356094.1-201ENST00000624663 1212 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AC093591.3-201ENST00000634516 308 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AC010149.2-201ENST00000637608 315 ntBASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CLHC1Q8NHS4 AC110491.1-201ENST00000562191 2010 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 RNU4-82P-201ENST00000362443 140 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 RNU6-343P-201ENST00000364709 104 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 RNU2-42P-201ENST00000410697 113 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AC007435.1-201ENST00000421086 415 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 BX276092.3-201ENST00000424182 230 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AIMP1P2-201ENST00000425294 312 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 RPL30P4-201ENST00000429309 333 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AC002381.1-201ENST00000447049 280 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AL021397.1-201ENST00000451806 248 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 MTND1P9-201ENST00000453775 944 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 ATG12P2-201ENST00000456830 416 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AC023825.1-201ENST00000566704 1030 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 MIR3912-201ENST00000577566 105 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AL096840.1-201ENST00000603287 93 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AC099785.1-201ENST00000605697 437 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 AC068276.1-201ENST00000605793 379 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 PISRT1-201ENST00000626175 531 ntBASIC2.03□□□□□ -2.08
CLHC1Q8NHS4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 XGY1-201ENST00000381172 446 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AL603865.2-201ENST00000401679 213 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 U6atac.2-201ENST00000408644 118 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 USP9YP19-201ENST00000412165 485 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 USP9YP13-201ENST00000417797 480 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 USP9YP21-201ENST00000420603 432 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AC098831.1-201ENST00000440661 216 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 RPL32P28-201ENST00000443577 397 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 snoU13.8-201ENST00000458890 104 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AC008526.1-201ENST00000509149 338 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 LTV1P1-201ENST00000510683 1237 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 RNU6-583P-201ENST00000516012 92 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 RNU6-714P-201ENST00000516963 103 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AC025755.1-201ENST00000521306 278 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AC005951.2-201ENST00000576282 495 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AC024619.4-201ENST00000580924 316 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AC002545.1-201ENST00000592511 181 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AP002802.2-201ENST00000605877 235 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 MIR3199-2-201ENST00000636243 86 ntBASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CLHC1Q8NHS4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms