Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MTND5P8-201ENST00000449817 1083 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC078857.1-201ENST00000469870 667 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 BZW1P2-201ENST00000473537 826 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RNU5F-8P-201ENST00000515941 111 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 CR381572.1-201ENST00000625098 102 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RNU6-1226P-201ENST00000384317 107 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 HMGN3P1-201ENST00000453847 193 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RNU6-1095P-201ENST00000516148 108 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RNA5SP364-201ENST00000516938 78 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 HIGD1AP6-201ENST00000521833 279 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 ERHP1-201ENST00000523006 310 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC087272.1-201ENST00000523624 533 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AP003072.2-201ENST00000527756 676 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 HSBP1P1-201ENST00000555205 166 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC008749.1-201ENST00000597650 306 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC073308.1-201ENST00000623696 305 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 MIR517C-201ENST00000385103 95 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AP002784.2-201ENST00000397300 549 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AL355615.1-201ENST00000406187 641 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RPS3AP44-201ENST00000425466 790 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 HMGN2P18-201ENST00000450680 270 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RNU7-23P-201ENST00000459465 62 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RPS27P21-201ENST00000486977 252 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC074051.3-201ENST00000570238 358 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AP001330.4-201ENST00000604350 154 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC079395.3-201ENST00000615161 484 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 MTCO1P18-201ENST00000455518 1419 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RNU1-22P-201ENST00000363334 158 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RNU6-105P-201ENST00000363909 104 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 ZNF863P-201ENST00000426746 417 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 Z82190.1-201ENST00000454534 490 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RPS23P4-201ENST00000487908 423 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC010186.2-204ENST00000537668 439 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
SYNE1Q8NF91 AC090116.1-201ENST00000615679 446 ntBASIC0.46□□□□□ -2.34
SYNE1Q8NF91 RNU6-1243P-201ENST00000364028 107 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC025755.1-201ENST00000521306 278 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 SUB1P1-201ENST00000524415 382 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 CASP1P1-201ENST00000526345 212 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 MIR4287-201ENST00000579398 78 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 MTND5P10-201ENST00000603719 1809 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 MTND4P8-201ENST00000514997 1362 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC009812.4-201ENST00000569134 1805 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 RNU6-1155P-201ENST00000363554 107 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 SNORA67.6-201ENST00000391093 99 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AL513475.1-201ENST00000406602 315 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 PIGFP3-201ENST00000441918 722 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC107626.1-201ENST00000471084 183 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC006390.1-201ENST00000508068 283 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC090517.3-201ENST00000625170 141 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AL021397.1-201ENST00000451806 248 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC023141.11-201ENST00000508864 202 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC021146.7-201ENST00000509604 775 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AC022880.1-201ENST00000534017 973 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 SNORD53B-201ENST00000577887 78 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 AL773524.1-201ENST00000614065 229 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 MTND5P31-201ENST00000419366 1374 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.45□□□□□ -2.34
SYNE1Q8NF91 MTND4P1-201ENST00000457501 1466 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 RNU6-1035P-201ENST00000384477 107 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 RNU6-1077P-201ENST00000410506 102 ntBASIC0.45□□□□□ -2.34
SYNE1Q8NF91 PGBD4P6-201ENST00000421501 610 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms