Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.66□□□□□ -1.82
USP38Q8NB14 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.66□□□□□ -1.82
USP38Q8NB14 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.66□□□□□ -1.82
USP38Q8NB14 AL161729.4-201ENST00000604650 476 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AL451064.1-201ENST00000607718 471 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC103710.2-201ENST00000609912 942 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC013476.2-201ENST00000614456 459 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.66□□□□□ -1.82
USP38Q8NB14 AL589994.2-201ENST00000621124 579 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.66□□□□□ -1.82
USP38Q8NB14 FRG1KP-201ENST00000623592 341 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 SDAD1P2-201ENST00000441308 2028 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
USP38Q8NB14 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.66□□□□□ -1.82
USP38Q8NB14 AC002546.1-201ENST00000588041 2504 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 MAPK10-362ENST00000641864 4484 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.65□□□□□ -1.82
USP38Q8NB14 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.65□□□□□ -1.82
USP38Q8NB14 OR5J1P-201ENST00000313544 939 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
USP38Q8NB14 RNU4-82P-201ENST00000362443 140 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 RNU6-1284P-201ENST00000363701 100 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 RNU6-701P-201ENST00000384059 107 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 NDUFS5P1-201ENST00000405668 289 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.65□□□□□ -1.83
USP38Q8NB14 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.65□□□□□ -1.83
USP38Q8NB14 AC007919.1-201ENST00000429380 217 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 MTATP6P30-201ENST00000443540 664 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.65□□□□□ -1.83
USP38Q8NB14 HMGN1P18-201ENST00000457642 277 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 RNA5SP310-201ENST00000459084 116 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.65□□□□□ -1.83
USP38Q8NB14 RNU7-51P-201ENST00000516560 62 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 HMGB1P41-201ENST00000520234 440 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 AC100870.1-201ENST00000522035 505 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.65□□□□□ -1.83
USP38Q8NB14 AC124947.2-202ENST00000552735 133 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.65□□□□□ -1.83
USP38Q8NB14 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.65□□□□□ -1.83
USP38Q8NB14 AL391840.1-201ENST00000571144 367 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 MIR3167-201ENST00000579623 85 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 AC067852.3-201ENST00000589177 561 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 AL136363.1-201ENST00000605349 337 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 IGHVIII-44-202ENST00000636235 289 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
USP38Q8NB14 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
USP38Q8NB14 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP38Q8NB14 AC007496.3-201ENST00000624987 3443 ntBASIC3.65□□□□□ -1.83
USP38Q8NB14 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
USP38Q8NB14 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.65□□□□□ -1.83
USP38Q8NB14 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
USP38Q8NB14 AC092447.7-201ENST00000422212 1621 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 RNU6-805P-201ENST00000365643 106 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 RNU5A-6P-201ENST00000384136 116 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
USP38Q8NB14 Z99755.1-201ENST00000414048 380 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 RAC1P6-201ENST00000423911 575 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 AC104651.1-201ENST00000427559 735 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.64□□□□□ -1.83
USP38Q8NB14 GAPDHP27-201ENST00000447427 1020 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.64□□□□□ -1.83
USP38Q8NB14 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.64□□□□□ -1.83
USP38Q8NB14 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.64□□□□□ -1.83
USP38Q8NB14 RPS3AP17-201ENST00000472594 777 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.64□□□□□ -1.83
USP38Q8NB14 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.64□□□□□ -1.83
USP38Q8NB14 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.64□□□□□ -1.83
USP38Q8NB14 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.64□□□□□ -1.83
USP38Q8NB14 AC107934.2-201ENST00000518653 310 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 AC104027.1-201ENST00000521887 300 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.64□□□□□ -1.83
USP38Q8NB14 AC245505.1-201ENST00000556398 224 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 AC087241.4-201ENST00000612441 480 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 AC018692.3-201ENST00000623929 123 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 AC017071.1-201ENST00000564407 2204 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP38Q8NB14 AL136360.1-201ENST00000503377 1900 ntBASIC3.64□□□□□ -1.83
USP38Q8NB14 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP38Q8NB14 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
USP38Q8NB14 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.63□□□□□ -1.83
USP38Q8NB14 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.63□□□□□ -1.83
USP38Q8NB14 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP38Q8NB14 RNA5SP197-201ENST00000363357 119 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 RNU6-511P-201ENST00000363496 107 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 Y_RNA.296-201ENST00000364930 108 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 RNU6-39P-201ENST00000384344 107 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 SNORD116-4-201ENST00000384733 96 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 RNU6-1197P-201ENST00000391183 107 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 RNU2-66P-201ENST00000410650 161 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 AL451054.2-201ENST00000420896 202 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 TMEM167AP1-201ENST00000423409 219 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.63□□□□□ -1.83
USP38Q8NB14 ATP5C1P1-201ENST00000441945 895 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.63□□□□□ -1.83
USP38Q8NB14 AC008264.1-201ENST00000447612 367 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 SNORD97-201ENST00000459187 142 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 TTC39CP1-201ENST00000512513 755 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 SCARNA15.2-201ENST00000516409 127 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 NRON-201ENST00000517270 370 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms