Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RPS15AP27-201ENST00000449183 343 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC091435.1-201ENST00000505442 584 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 SCARNA13-201ENST00000516672 275 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC026241.1-201ENST00000517873 2142 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 SUB1P1-201ENST00000524415 382 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AP000857.1-201ENST00000532151 543 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AL391261.3-201ENST00000557194 520 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AL133153.1-201ENST00000557756 303 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AL451007.1-201ENST00000595491 289 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC012065.4-201ENST00000602445 679 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC024153.1-201ENST00000603103 365 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC019159.1-201ENST00000605094 187 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC007038.2-201ENST00000608095 740 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC084782.3-201ENST00000612282 578 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 MTND4P4-201ENST00000439033 1366 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC108206.1-201ENST00000570186 4159 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC092125.1-201ENST00000562568 1995 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 MTND5P33-201ENST00000571250 1450 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 RNU5F-6P-201ENST00000362979 116 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC096664.2-201ENST00000411843 406 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 RPL17P12-201ENST00000413391 526 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AL451074.5-201ENST00000415894 435 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AL358075.3-201ENST00000426289 226 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC109583.1-201ENST00000432156 268 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 OR2B8P-201ENST00000432841 938 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 RNU7-59P-201ENST00000459101 61 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 SEM1P1-201ENST00000506694 209 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC114786.4-201ENST00000508771 728 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC114797.1-201ENST00000514003 728 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 Y_RNA.695-201ENST00000516715 107 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC128657.1-201ENST00000549459 145 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 MIR4307-201ENST00000582802 84 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC073544.2-201ENST00000601155 540 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC239868.4-201ENST00000608318 671 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC090115.4-201ENST00000609970 188 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC103710.1-201ENST00000610003 901 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 FTX_3.1-201ENST00000610451 147 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 AC009509.4-201ENST00000619202 509 ntBASIC2.93□□□□□ -1.94
RTL3Q8N8U3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RTL3Q8N8U3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 SNORD116-4-201ENST00000384733 96 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 CCNG1P1-201ENST00000406783 885 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 MTCO3P5-201ENST00000433620 714 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 RPS20P5-201ENST00000434808 360 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AL353706.1-201ENST00000436728 494 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AL831737.1-201ENST00000441288 271 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 RPL26P9-201ENST00000457466 433 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 RNA5SP269-201ENST00000459032 137 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 RPL31P41-201ENST00000477967 372 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AC010424.1-201ENST00000506336 297 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 RNA5SP290-201ENST00000517133 127 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AC013828.2-201ENST00000532487 235 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AC093012.1-202ENST00000549403 582 ntBASIC2.92□□□□□ -1.94
RTL3Q8N8U3 AC010546.1-201ENST00000569391 485 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms