Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC022880.1-201ENST00000534017 973 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 TRAV28-201ENST00000557548 323 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 MIR4672-201ENST00000583126 81 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC098848.2-201ENST00000588023 330 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC006023.1-201ENST00000603944 259 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC093732.2-201ENST00000607950 274 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC034102.8-201ENST00000615146 484 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC092628.2-201ENST00000622492 339 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 MTND4P5-201ENST00000435821 1374 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AL049641.1-201ENST00000441055 1948 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AL353746.1-201ENST00000566293 6881 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AC022336.2-201ENST00000568966 2538 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 RNA5SP42-201ENST00000364278 115 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 RNU6-641P-201ENST00000384006 107 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 MIR558-201ENST00000384920 94 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AC104651.1-201ENST00000427559 735 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 USP9YP14-201ENST00000430663 563 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AL512844.2-201ENST00000433990 593 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 HMGB3P12-201ENST00000438745 556 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AC107083.1-201ENST00000439643 279 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 C1DP4-201ENST00000455429 424 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AC004924.1-201ENST00000480160 781 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AC105252.1-201ENST00000503089 286 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AP003072.2-201ENST00000527756 676 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 HMGB1P14-201ENST00000557424 591 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 MIR4474-201ENST00000579189 78 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AC067852.3-201ENST00000589177 561 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AC025165.5-201ENST00000602802 578 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AC015540.1-201ENST00000615828 501 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AC068880.5-201ENST00000624331 290 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 AL137790.1-201ENST00000634283 177 ntBASIC3.62□□□□□ -1.83
HERC6Q8IVU3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HERC6Q8IVU3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 RNU6-108P-201ENST00000365558 107 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 RNU6-259P-201ENST00000383999 107 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 RNU6-301P-201ENST00000384277 107 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 Y_RNA.505-201ENST00000384489 102 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 Y_RNA.517-201ENST00000384551 106 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 RNU6-817P-201ENST00000391083 104 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 GSTA9P-201ENST00000406231 611 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 RNU2-33P-201ENST00000410344 192 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 BTF3L4P3-201ENST00000418879 476 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 Z82210.1-201ENST00000440037 231 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 TPT1P7-201ENST00000458300 517 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 RNU6-677P-201ENST00000516914 101 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 RNU6-143P-201ENST00000516942 93 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AP006587.4-201ENST00000526053 529 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC010546.1-201ENST00000569391 485 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 MIR4425-201ENST00000580572 84 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 RPL12P50-201ENST00000603116 116 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AL136363.2-201ENST00000604173 851 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC107294.1-201ENST00000609524 467 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 RMST_8.1-201ENST00000610287 165 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC138649.3-201ENST00000622154 254 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC084035.1-201ENST00000634543 607 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 MTND1P37-201ENST00000636562 264 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms