Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.86□□□□□ -1.79
VRK3Q8IV63 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.86□□□□□ -1.79
VRK3Q8IV63 AC010653.1-201ENST00000571108 881 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.86□□□□□ -1.79
VRK3Q8IV63 AC123786.2-201ENST00000603459 275 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 PRR13P7-201ENST00000605538 430 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 AC007485.1-201ENST00000616755 206 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.86□□□□□ -1.79
VRK3Q8IV63 MIR4727-201ENST00000622232 55 ntBASIC3.86□□□□□ -1.79
VRK3Q8IV63 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.86□□□□□ -1.79
VRK3Q8IV63 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VRK3Q8IV63 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.86□□□□□ -1.79
VRK3Q8IV63 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VRK3Q8IV63 EXOC5P1-201ENST00000510543 1969 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VRK3Q8IV63 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VRK3Q8IV63 Y_RNA.80-201ENST00000362996 102 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 Y_RNA.399-201ENST00000383955 105 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 SNORA75B-201ENST00000384053 137 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 RNY1P14-201ENST00000384426 108 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 SNORD3H-201ENST00000384486 214 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 RNU6-1222P-201ENST00000384615 107 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 RNU6-754P-201ENST00000391166 107 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AL391417.1-201ENST00000404100 426 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AL445189.1-201ENST00000405722 338 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 RNA5SP39-201ENST00000411245 120 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 RPL7AP73-201ENST00000413490 353 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 USP9YP16-201ENST00000430287 407 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 RPL21P112-201ENST00000434403 463 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 HMGB1P37-201ENST00000439613 609 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 PPIAP3-201ENST00000450588 505 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 USP9YP23-201ENST00000455085 407 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 U8.20-201ENST00000459445 131 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC128713.1-201ENST00000471495 306 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 HIGD1AP13-201ENST00000509878 289 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 RNU6-1016P-201ENST00000516689 94 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC100870.1-201ENST00000522035 505 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC023442.1-201ENST00000531247 422 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 SETP7-201ENST00000552169 453 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC090115.3-201ENST00000553218 849 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC120057.2-201ENST00000571520 271 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC008521.1-201ENST00000587471 187 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 DUSP12P1-201ENST00000612874 516 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AL355365.1-201ENST00000616480 294 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AL591424.2-201ENST00000617023 128 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 AC091925.2-201ENST00000625059 256 ntBASIC3.85□□□□□ -1.79
VRK3Q8IV63 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VRK3Q8IV63 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
VRK3Q8IV63 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VRK3Q8IV63 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
VRK3Q8IV63 PHKBP1-201ENST00000450951 1951 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 RNU6-1284P-201ENST00000363701 100 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 RNU6-1078P-201ENST00000364522 103 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 RNA5SP479-201ENST00000364858 117 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 Y_RNA.364-201ENST00000365532 101 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 SET-203ENST00000372688 801 ntTSL 2 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 RNU6-890P-201ENST00000384121 107 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 SNORD51-201ENST00000384320 80 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 Y_RNA.476-201ENST00000384347 108 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 Y_RNA.527-201ENST00000384573 102 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 SNORA75.6-201ENST00000391318 127 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 BX682237.1-201ENST00000415016 335 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 CALM2P2-201ENST00000428512 440 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 RPL35AP22-201ENST00000436855 335 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 RPL12P25-201ENST00000455592 494 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 RPL21P8-201ENST00000465083 535 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 RPS27AP1-201ENST00000475545 471 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 PPIAP15-201ENST00000479662 484 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 AC015911.1-201ENST00000495111 156 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 AC135721.1-201ENST00000497954 479 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.84□□□□□ -1.79
VRK3Q8IV63 MRPS35P2-201ENST00000508242 191 ntBASIC3.84□□□□□ -1.79
VRK3Q8IV63 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms