Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 FAM92A1P1-201ENST00000528023 890 ntBASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 ZNF519P2-201ENST00000557032 169 ntBASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 AF250324.2-201ENST00000608299 610 ntBASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 AC007318.2-201ENST00000620999 243 ntBASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 CR381653.2-201ENST00000624041 768 ntBASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 AL160394.1-201ENST00000624765 724 ntBASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 AC243829.7-201ENST00000633081 225 ntBASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.04□□□□□ -1.76
KRT28Q7Z3Y7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 RNU6-173P-201ENST00000364215 104 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 XGY1-201ENST00000381172 446 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 RPS3AP24-201ENST00000407896 734 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 RNA5SP107-201ENST00000411358 122 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 RHEBP3-201ENST00000411920 351 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 TOMM22P1-201ENST00000418578 312 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 ISCA1P1-201ENST00000426679 387 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 AC079780.1-201ENST00000428259 207 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 RPL21P112-201ENST00000434403 463 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 AC002486.1-201ENST00000435098 391 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 YWHAEP4-201ENST00000505390 198 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 RNU4-29P-201ENST00000515943 174 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 RNU1-41P-201ENST00000516161 162 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 RNU1-48P-201ENST00000516400 162 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 RNU6-64P-201ENST00000517119 105 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 MTND4LP26-201ENST00000518144 282 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 AC022616.3-201ENST00000523940 148 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 AC109635.4-202ENST00000531666 412 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 AC124947.2-202ENST00000552735 133 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 TGIF1P1-201ENST00000558095 802 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 AC126118.1-201ENST00000607744 628 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 AC066616.2-201ENST00000559334 1481 ntBASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
KRT28Q7Z3Y7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.03□□□□□ -1.77
KRT28Q7Z3Y7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 OR56A5-201ENST00000340110 738 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 Y_RNA.1-201ENST00000352915 104 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 RNU5E-8P-201ENST00000363502 116 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 RNU6-282P-201ENST00000365357 103 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 RNA5SP167-201ENST00000365461 116 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 RNU6-456P-201ENST00000384493 107 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AL360182.1-201ENST00000397433 468 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 MTCO2P11-201ENST00000431069 680 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 RPS20P5-201ENST00000434808 360 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AC126182.1-201ENST00000478134 357 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AF213884.2-201ENST00000510417 903 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AC123904.3-201ENST00000547218 814 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 SUB1P2-201ENST00000556401 297 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 TPRKBP2-201ENST00000565969 475 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 FAM60BP-201ENST00000578364 658 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AF038458.1-201ENST00000588406 262 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AC024153.1-201ENST00000603103 365 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 TUG1_2.1-201ENST00000614234 87 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 U4.5-201ENST00000617137 123 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 AL157700.1-201ENST00000561973 1432 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.02□□□□□ -1.77
KRT28Q7Z3Y7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 SNORD56.2-201ENST00000363242 71 ntBASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 U3.11-201ENST00000364476 212 ntBASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 U3.12-201ENST00000364498 214 ntBASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 MIR196B-201ENST00000384852 84 ntBASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 MTCO3P40-201ENST00000392516 676 ntBASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 RPL21P24-201ENST00000413752 448 ntBASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 EIF1P1-201ENST00000421436 341 ntBASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 AC090774.1-201ENST00000435925 246 ntBASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 AC132479.1-201ENST00000449160 144 ntBASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 AL162389.1-201ENST00000449233 177 ntBASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.01□□□□□ -1.77
KRT28Q7Z3Y7 RNU2-10P-201ENST00000516375 211 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms