Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 RPL36AP53-201ENST00000432891 316 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AC116347.2-201ENST00000514912 523 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 MRPS36P5-201ENST00000551909 298 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 ISCA1P3-201ENST00000577104 373 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AC018714.1-201ENST00000605028 208 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AL359198.2-201ENST00000611836 194 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 MIR3199-2-201ENST00000636243 86 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 ELF2P3-201ENST00000445099 1506 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AC092447.7-201ENST00000422212 1621 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 RNU6-778P-201ENST00000363269 103 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 MIR592-201ENST00000384959 97 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 RPL23AP39-201ENST00000415533 405 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AC096649.2-201ENST00000416186 393 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 ZNF90P2-204ENST00000419323 1075 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 RPS27AP14-201ENST00000422868 454 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 SKA2P1-201ENST00000425592 390 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 RPL36AP6-201ENST00000435770 321 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AC098831.1-201ENST00000440661 216 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AL606662.1-201ENST00000445763 553 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AC128713.1-201ENST00000471495 306 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 SCARNA17.1-201ENST00000516211 143 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 SCARNA17.2-201ENST00000516334 143 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 RNU1-103P-201ENST00000516502 125 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 RPPH1-2P-201ENST00000516688 293 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 RNU6-678P-201ENST00000516832 109 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 SNORA31.18-201ENST00000517043 134 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 RNU6-1003P-201ENST00000517099 105 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 MIR3146-201ENST00000580367 79 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 ZNF861P-201ENST00000588126 639 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 VN1R90P-201ENST00000595717 726 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AC234772.3-201ENST00000602277 528 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 DUSP12P1-201ENST00000612874 516 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 SCARNA17.4-201ENST00000614296 143 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AC079416.3-201ENST00000624479 549 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 U2.21-201ENST00000637295 81 ntBASIC2.5□□□□□ -2.01
NIPAL3Q6P499 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NIPAL3Q6P499 AL365361.1-201ENST00000566942 3481 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 RNU6-1214P-201ENST00000363650 109 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 RNU1-109P-201ENST00000383960 147 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 RNU6-701P-201ENST00000384059 107 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 SNORA18.3-201ENST00000384122 132 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 RNU2-62P-201ENST00000410868 191 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 Z92545.1-201ENST00000411782 234 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AC096664.2-201ENST00000411843 406 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 RPL37P21-201ENST00000435890 276 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 OSTCP8-201ENST00000445117 448 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AC098591.2-201ENST00000510152 315 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AC091826.1-201ENST00000514065 313 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 SNORA31.3-201ENST00000516029 96 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 SCARNA11.3-201ENST00000517276 130 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 MRPS36P3-201ENST00000519284 130 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 MIR3117-201ENST00000584034 78 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AP000403.1-201ENST00000603349 851 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AL355598.1-201ENST00000604169 202 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 RPL23AP88-201ENST00000605759 454 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 AC135507.2-201ENST00000612443 309 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.49□□□□□ -2.01
NIPAL3Q6P499 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.49□□□□□ -2.01
NIPAL3Q6P499 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms