Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MIR135A2-201ENST00000384854 100 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 SNORD66.1-201ENST00000391230 76 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-1050P-201ENST00000410388 107 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AL590632.1-201ENST00000424289 371 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AL591704.1-201ENST00000432574 275 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AC236972.1-201ENST00000433225 199 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 IFNWP4-201ENST00000453148 294 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AC117503.1-201ENST00000472241 394 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AC015911.1-201ENST00000495111 156 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-352P-201ENST00000516908 107 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AC068446.3-201ENST00000555285 382 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 MTCO3P23-201ENST00000561363 289 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AC120057.2-201ENST00000571520 271 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AC174048.1-201ENST00000603389 144 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AC104763.2-201ENST00000604179 382 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AC012468.1-201ENST00000604888 430 ntBASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 Y_RNA.463-201ENST00000384271 102 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 MIR568-201ENST00000385036 95 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 SNORA75.6-201ENST00000391318 127 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 Y_RNA.594-201ENST00000410373 140 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 RAB9AP3-201ENST00000412737 573 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 RPL23AP33-201ENST00000442301 452 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 NOTCH2P1-201ENST00000443481 624 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 RAB9AP1-201ENST00000449393 573 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 ABCF2P2-201ENST00000450549 296 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 RPL7P49-201ENST00000471402 708 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AP006587.4-201ENST00000526053 529 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 CYCSP27-201ENST00000527643 293 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AC026371.1-201ENST00000551867 419 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AC022655.2-201ENST00000577280 318 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AL355598.1-201ENST00000604169 202 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AC018462.2-201ENST00000605375 395 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AC007619.2-201ENST00000605743 379 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AL162373.1-201ENST00000620433 407 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AL161912.2-201ENST00000565707 3007 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 AC093535.2-201ENST00000624769 2326 ntBASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF40BQ6NWY9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 LINC01109-201ENST00000603837 3081 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 MTND5P30-201ENST00000452896 1731 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 RNU1-15P-201ENST00000353977 144 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 RNA5SP119-201ENST00000362715 117 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 Y_RNA.252-201ENST00000364556 101 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-214P-201ENST00000384130 107 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 Y_RNA.473-201ENST00000384333 102 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-505P-201ENST00000384427 107 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 Y_RNA.557-201ENST00000384680 107 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 MIR548F4-201ENST00000408515 105 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 RNA5SP146-201ENST00000410743 123 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 Y_RNA.618-201ENST00000410949 107 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AC092809.3-201ENST00000415453 231 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 RPL23AP46-201ENST00000438548 490 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 RPL21P103-201ENST00000479921 488 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 Y_RNA.670-201ENST00000516255 105 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 RN7SKP60-201ENST00000516985 239 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AP002404.1-201ENST00000532005 451 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 VN1R107P-201ENST00000601784 209 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AL450472.3-201ENST00000615578 367 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms