Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 OR56B2P-202ENST00000641377 2453 ntBASIC5.6□□□□□ -1.51
PRPF38BQ5VTL8 AC116096.1-201ENST00000566804 2314 ntBASIC5.6□□□□□ -1.51
PRPF38BQ5VTL8 AC090740.1-201ENST00000623193 2262 ntBASIC5.6□□□□□ -1.51
PRPF38BQ5VTL8 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF38BQ5VTL8 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PRPF38BQ5VTL8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF38BQ5VTL8 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.6□□□□□ -1.51
PRPF38BQ5VTL8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF38BQ5VTL8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PRPF38BQ5VTL8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF38BQ5VTL8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF38BQ5VTL8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 AC015813.6-201ENST00000624409 5808 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 RNU6-1301P-201ENST00000362724 104 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 RNU6-1020P-201ENST00000363684 107 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 RNU6-336P-201ENST00000364891 107 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 Y_RNA.626-201ENST00000411288 95 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 RPL7AP25-201ENST00000423357 805 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 RPEP3-201ENST00000425462 676 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 PTMAP3-201ENST00000447474 330 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 IFNWP4-201ENST00000453148 294 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 snoU109.2-201ENST00000459316 135 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 RNU6-572P-201ENST00000516724 80 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 MRPS36P4-201ENST00000534436 298 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 AC107016.1-201ENST00000550463 337 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 MIR132-201ENST00000591554 101 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 ARF4P1-201ENST00000605447 541 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 AC131238.1-201ENST00000617135 328 ntBASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF38BQ5VTL8 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PRPF38BQ5VTL8 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PRPF38BQ5VTL8 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
PRPF38BQ5VTL8 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
PRPF38BQ5VTL8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
PRPF38BQ5VTL8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 ASNSP1-201ENST00000518311 1939 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 A2MP1-204ENST00000566278 4130 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AL590240.1-201ENST00000334118 313 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 RNU6-222P-201ENST00000362438 107 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 SNORD1C-201ENST00000363315 78 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 RNU6-843P-201ENST00000384454 104 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 SNORA40C-201ENST00000391285 128 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AL356867.1-201ENST00000429623 299 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AL078601.1-201ENST00000444542 271 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 HSPE1P25-201ENST00000455484 251 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AC092754.1-201ENST00000472975 479 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AC139453.3-201ENST00000493276 369 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AC074198.2-201ENST00000508153 258 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 SNORA31.18-201ENST00000517043 134 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 NDUFB4P11-201ENST00000560510 395 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AC099654.2-201ENST00000433031 1980 ntBASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.58□□□□□ -1.52
PRPF38BQ5VTL8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms