Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL022238.1-201ENST00000442557 355 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AC105252.1-201ENST00000503089 286 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.71□□□□□ -2.3
RIF1Q5UIP0 VN1R84P-201ENST00000593697 235 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 Pinc.1-201ENST00000616452 154 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AC243829.3-201ENST00000622177 108 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 SNORA23-201ENST00000365128 182 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.7□□□□□ -2.3
RIF1Q5UIP0 HMGB1P9-201ENST00000429856 646 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 MTCO1P53-201ENST00000441633 699 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 SNRPGP12-201ENST00000449481 213 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 MIR4636-201ENST00000582271 80 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 AC006065.5-201ENST00000623427 349 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.7□□□□□ -2.3
RIF1Q5UIP0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
RIF1Q5UIP0 SNORA14A-201ENST00000364773 135 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 MIR17-201ENST00000385012 84 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 MIR524-201ENST00000385242 87 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 FO393413.1-201ENST00000402892 195 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.7□□□□□ -2.3
RIF1Q5UIP0 PTENP1-201ENST00000447117 1215 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.7□□□□□ -2.3
RIF1Q5UIP0 NAP1L1P3-201ENST00000462291 880 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.7□□□□□ -2.3
RIF1Q5UIP0 AC008749.1-201ENST00000597650 306 ntBASIC0.7□□□□□ -2.3
RIF1Q5UIP0 AC100821.1-201ENST00000523153 2479 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
RIF1Q5UIP0 RNU6-1180P-201ENST00000364935 107 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 RNU6-48P-201ENST00000384161 107 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 AL356867.1-201ENST00000429623 299 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 RAB9AP5-201ENST00000437794 597 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 SNRPFP2-201ENST00000440710 251 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 RAB9AP2-201ENST00000443911 597 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.69□□□□□ -2.3
RIF1Q5UIP0 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.69□□□□□ -2.3
RIF1Q5UIP0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.69□□□□□ -2.3
RIF1Q5UIP0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.69□□□□□ -2.3
RIF1Q5UIP0 AL161734.1-201ENST00000609720 557 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
RIF1Q5UIP0 OR5H6-203ENST00000642105 978 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 AC091812.1-201ENST00000432235 1948 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
RIF1Q5UIP0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
RIF1Q5UIP0 Y_RNA.644-201ENST00000459006 113 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.69□□□□□ -2.3
RIF1Q5UIP0 NBEAP1-201ENST00000554452 979 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 AC068714.1-201ENST00000559623 800 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 AC091304.6-201ENST00000619761 202 ntBASIC0.69□□□□□ -2.3
RIF1Q5UIP0 ZNF33CP-201ENST00000432492 2030 ntBASIC0.68□□□□□ -2.3
RIF1Q5UIP0 ELL2P3-201ENST00000457883 1602 ntBASIC0.68□□□□□ -2.3
RIF1Q5UIP0 AL157700.1-201ENST00000561973 1432 ntBASIC0.68□□□□□ -2.3
RIF1Q5UIP0 SNORD114-15-201ENST00000364687 72 ntBASIC0.68□□□□□ -2.3
RIF1Q5UIP0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
RIF1Q5UIP0 RNA5SP266-201ENST00000410273 108 ntBASIC0.68□□□□□ -2.3
RIF1Q5UIP0 MIR1912-201ENST00000410389 80 ntBASIC0.68□□□□□ -2.3
RIF1Q5UIP0 AC015922.2-201ENST00000435593 184 ntBASIC0.68□□□□□ -2.3
RIF1Q5UIP0 AC092628.1-201ENST00000436250 252 ntBASIC0.68□□□□□ -2.3
RIF1Q5UIP0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.68□□□□□ -2.3
RIF1Q5UIP0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.68□□□□□ -2.3
RIF1Q5UIP0 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.68□□□□□ -2.3
RIF1Q5UIP0 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
RIF1Q5UIP0 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.68□□□□□ -2.3
RIF1Q5UIP0 OR4G3P-201ENST00000633500 913 ntBASIC0.68□□□□□ -2.3
RIF1Q5UIP0 SNORA63.3-201ENST00000362682 132 ntBASIC0.67□□□□□ -2.3
RIF1Q5UIP0 AC098591.2-201ENST00000510152 315 ntBASIC0.67□□□□□ -2.3
RIF1Q5UIP0 AP004247.1-201ENST00000531556 1289 ntBASIC0.67□□□□□ -2.3
RIF1Q5UIP0 OSBPL9P3-201ENST00000534523 595 ntBASIC0.67□□□□□ -2.3
RIF1Q5UIP0 AC022662.1-201ENST00000580252 331 ntBASIC0.67□□□□□ -2.3
RIF1Q5UIP0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
RIF1Q5UIP0 RLIMP2-201ENST00000427891 1563 ntBASIC0.67□□□□□ -2.3
RIF1Q5UIP0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.67□□□□□ -2.3
RIF1Q5UIP0 CCNB2P1-201ENST00000399411 1150 ntBASIC0.67□□□□□ -2.3
RIF1Q5UIP0 AC092745.2-202ENST00000411880 369 ntBASIC0.67□□□□□ -2.3
RIF1Q5UIP0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.67□□□□□ -2.3
RIF1Q5UIP0 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.67□□□□□ -2.3
RIF1Q5UIP0 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.67□□□□□ -2.3
RIF1Q5UIP0 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.67□□□□□ -2.3
RIF1Q5UIP0 AC069277.2-201ENST00000454211 432 ntBASIC0.67□□□□□ -2.3
RIF1Q5UIP0 RNU6-758P-201ENST00000516292 89 ntBASIC0.67□□□□□ -2.3
RIF1Q5UIP0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.67□□□□□ -2.3
RIF1Q5UIP0 SNORA46.1-201ENST00000391069 153 ntBASIC0.66□□□□□ -2.3
RIF1Q5UIP0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.66□□□□□ -2.3
RIF1Q5UIP0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.66□□□□□ -2.3
RIF1Q5UIP0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.66□□□□□ -2.3
RIF1Q5UIP0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.66□□□□□ -2.3
RIF1Q5UIP0 HSPE1P24-201ENST00000450782 238 ntBASIC0.66□□□□□ -2.3
RIF1Q5UIP0 AC010099.1-201ENST00000455434 375 ntBASIC0.66□□□□□ -2.3
RIF1Q5UIP0 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.66□□□□□ -2.3
RIF1Q5UIP0 AC091965.2-201ENST00000512324 613 ntBASIC0.66□□□□□ -2.3
RIF1Q5UIP0 LDHBP3-201ENST00000514909 822 ntBASIC0.66□□□□□ -2.3
RIF1Q5UIP0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.66□□□□□ -2.3
RIF1Q5UIP0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.66□□□□□ -2.3
RIF1Q5UIP0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.66□□□□□ -2.3
RIF1Q5UIP0 LLPHP1-201ENST00000603571 367 ntBASIC0.66□□□□□ -2.3
RIF1Q5UIP0 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
RIF1Q5UIP0 HMGB1P24-202ENST00000615653 685 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms