Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RNU6-390P-201ENST00000516259 103 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 RNA5SP76-201ENST00000516277 87 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 RN7SL652P-201ENST00000577769 300 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 AC067852.3-201ENST00000589177 561 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 AC009314.1-201ENST00000603871 304 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 MIR8076-201ENST00000611401 83 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 TUG1_2.1-201ENST00000614234 87 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 IQCB2P-201ENST00000401788 1633 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 AC092681.1-201ENST00000297369 291 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 RNU6-989P-201ENST00000362756 107 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 RNU6-239P-201ENST00000390990 99 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 AC073465.2-201ENST00000440938 498 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 AC091912.1-201ENST00000511351 248 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 AC098976.1-201ENST00000513014 541 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 RNU5E-3P-201ENST00000515913 68 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 RN7SKP260-201ENST00000516907 149 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 TOMM20P2-201ENST00000540082 421 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 NDUFB4P11-201ENST00000560510 395 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 ATP5J2P6-201ENST00000565203 266 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 AC104581.2-201ENST00000572227 430 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 RN7SL290P-201ENST00000578661 300 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 MIR4284-201ENST00000578924 81 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 LRRC37A5P-203ENST00000580181 585 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 AC008749.1-201ENST00000597650 306 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 RPL23AP78-201ENST00000599928 470 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 AC009951.1-201ENST00000623674 2614 ntBASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
CTC1Q2NKJ3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AC104260.2-201ENST00000623551 3497 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 RNU6-1144P-201ENST00000384247 104 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 SNORA46.1-201ENST00000391069 153 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 RNU11-4P-201ENST00000391149 133 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 U3.35-201ENST00000408405 208 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AL390729.2-201ENST00000416137 156 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 RPL21P40-201ENST00000428586 483 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 RPL34P20-201ENST00000442771 351 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AC090804.1-201ENST00000448870 490 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AL160314.1-201ENST00000490836 438 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AC020890.1-201ENST00000491837 504 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 RNU6-513P-201ENST00000516104 104 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AC090616.3-201ENST00000582184 217 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AP000769.2-201ENST00000602344 396 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 MIR15A-201ENST00000607334 83 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 AC099506.2-201ENST00000623074 221 ntBASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CTC1Q2NKJ3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 AC110491.1-201ENST00000562191 2010 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 GVINP1-202ENST00000531871 7271 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 Y_RNA.75-201ENST00000362927 97 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 RNA5SP428-201ENST00000365129 132 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 SNORD51-201ENST00000384320 80 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 RNU4-65P-201ENST00000410473 140 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 RNU6-607P-201ENST00000411283 108 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 RPL7AP73-201ENST00000413490 353 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 COX5BP7-201ENST00000414780 274 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 U8.21-201ENST00000459536 136 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 TOMM22P6-201ENST00000465035 409 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 ATP5F1P5-201ENST00000526403 760 ntBASIC5.5□□□□□ -1.53
CTC1Q2NKJ3 AC027369.5-201ENST00000533838 755 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms