Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCB1Q12824 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCB1Q12824 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCB1Q12824 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.39□□□□□ -2.03
SMARCB1Q12824 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCB1Q12824 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCB1Q12824 AC068313.1-201ENST00000604028 1008 ntBASIC2.39□□□□□ -2.03
SMARCB1Q12824 AC011451.2-201ENST00000604303 598 ntBASIC2.39□□□□□ -2.03
SMARCB1Q12824 AL136363.1-201ENST00000605349 337 ntBASIC2.39□□□□□ -2.03
SMARCB1Q12824 MIR6130-201ENST00000619419 109 ntBASIC2.39□□□□□ -2.03
SMARCB1Q12824 AC011330.2-201ENST00000621680 635 ntBASIC2.39□□□□□ -2.03
SMARCB1Q12824 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SMARCB1Q12824 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.39□□□□□ -2.03
SMARCB1Q12824 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.39□□□□□ -2.03
SMARCB1Q12824 AP006437.1-201ENST00000641440 3685 ntBASIC2.39□□□□□ -2.03
SMARCB1Q12824 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMARCB1Q12824 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC092447.10-201ENST00000620607 1652 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMARCB1Q12824 RNU6-97P-201ENST00000363387 104 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 SET-203ENST00000372688 801 ntTSL 2 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 RNU1-39P-201ENST00000383897 165 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 SNORA6-201ENST00000384033 151 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 NPM1P11-201ENST00000417106 855 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC092573.2-201ENST00000434546 243 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMARCB1Q12824 AP000542.1-201ENST00000448473 371 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 RPL23AP70-201ENST00000483361 460 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC021382.1-201ENST00000483523 359 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 RNU5A-4P-201ENST00000516588 111 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 IGKV3-31-201ENST00000523109 329 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC087465.1-201ENST00000560574 245 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 ISCA1P3-201ENST00000577104 373 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 AL645944.1-201ENST00000603857 493 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC013553.2-201ENST00000604244 589 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 MIR6840-201ENST00000611937 71 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 AC009831.4-201ENST00000620744 325 ntBASIC2.38□□□□□ -2.03
SMARCB1Q12824 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
SMARCB1Q12824 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMARCB1Q12824 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SMARCB1Q12824 OR4G2P-202ENST00000641004 1759 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 RPL21P132-201ENST00000331267 462 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 DEFB108F-201ENST00000344638 222 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 MIR1261-201ENST00000408659 82 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 CCDC58P2-201ENST00000417131 366 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 AC234781.2-201ENST00000426370 994 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AL135752.1-201ENST00000479477 471 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AL049874.1-201ENST00000489560 388 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 DEFB108D-201ENST00000527787 222 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 MIR4760-201ENST00000585040 80 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 VN1R82P-201ENST00000601481 356 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 AC013244.3-201ENST00000605614 388 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 AP002826.1-201ENST00000608835 315 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 AP000240.1-201ENST00000609910 452 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 AC027309.3-201ENST00000623419 351 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 AL356596.1-201ENST00000624230 379 ntBASIC2.37□□□□□ -2.03
SMARCB1Q12824 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCB1Q12824 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMARCB1Q12824 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.36□□□□□ -2.03
SMARCB1Q12824 RNU6-931P-201ENST00000363850 107 ntBASIC2.36□□□□□ -2.03
SMARCB1Q12824 RNU6-1078P-201ENST00000364522 103 ntBASIC2.36□□□□□ -2.03
SMARCB1Q12824 MIR221-201ENST00000385135 110 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms