Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 ATG12P2-201ENST00000456830 416 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 RPS29P11-201ENST00000496507 171 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXC5Q00444 RNU7-193P-201ENST00000516723 65 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 RNU6-362P-201ENST00000516736 90 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 RNA5SP291-201ENST00000517222 105 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXC5Q00444 AP005902.1-201ENST00000521358 186 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 AC010186.2-204ENST00000537668 439 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXC5Q00444 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 AC090615.1-201ENST00000577519 154 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 AC090897.2-201ENST00000581715 130 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 AC008121.1-201ENST00000603244 268 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 RPP40P2-201ENST00000603596 712 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.68□□□□□ -2.14
HOXC5Q00444 AC002550.2-201ENST00000621246 394 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HOXC5Q00444 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
HOXC5Q00444 FAM133CP-201ENST00000332869 704 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 SNORD65.1-201ENST00000390889 71 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 RNU2-33P-201ENST00000410344 192 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 VN1R51P-201ENST00000411675 945 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 HMGB1P49-201ENST00000418882 569 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 BX119904.4-201ENST00000424402 301 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 HMGB1P9-201ENST00000429856 646 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 MED14P1-201ENST00000430517 648 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.67□□□□□ -2.14
HOXC5Q00444 RPS20P20-201ENST00000460498 340 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HOXC5Q00444 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
HOXC5Q00444 AC068781.1-201ENST00000488231 618 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
HOXC5Q00444 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.67□□□□□ -2.14
HOXC5Q00444 AC010486.1-201ENST00000511793 424 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 RPL23AP94-201ENST00000512518 302 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 AC022447.1-201ENST00000515358 464 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 RNU6-334P-201ENST00000517072 102 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 AC110588.1-201ENST00000559699 137 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 MIR5571-201ENST00000577998 113 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 AC002545.1-201ENST00000592511 181 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 AP000403.1-201ENST00000603349 851 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.67□□□□□ -2.14
HOXC5Q00444 AL445435.1-201ENST00000604232 665 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 AC136601.2-201ENST00000604356 474 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 AL450336.1-201ENST00000605180 586 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 AL021997.1-201ENST00000605757 193 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 AL589743.7-201ENST00000612637 233 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HOXC5Q00444 AL162373.1-201ENST00000620433 407 ntBASIC1.67□□□□□ -2.14
HOXC5Q00444 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.67□□□□□ -2.14
HOXC5Q00444 RNU6-216P-201ENST00000363282 104 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 Y_RNA.234-201ENST00000364409 97 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 RNU6-1083P-201ENST00000384022 107 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 RNU6-207P-201ENST00000384137 107 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 USP9YP15-201ENST00000442391 422 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.66□□□□□ -2.14
HOXC5Q00444 RNA5SP233-201ENST00000459153 113 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.66□□□□□ -2.14
HOXC5Q00444 AC026414.1-201ENST00000504046 698 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 SNORA31.23-201ENST00000517219 133 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 NRON-201ENST00000517270 370 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.66□□□□□ -2.14
HOXC5Q00444 AC103710.2-201ENST00000609912 942 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 AC078880.5-201ENST00000617845 421 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 OR1S1-201ENST00000624470 978 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 AC120349.2-201ENST00000625002 298 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 MTND1P37-201ENST00000636562 264 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HOXC5Q00444 MTCO1P4-201ENST00000520516 1409 ntBASIC1.66□□□□□ -2.14
HOXC5Q00444 AC010889.1-201ENST00000566193 2666 ntBASIC1.65□□□□□ -2.14
HOXC5Q00444 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
HOXC5Q00444 AC005539.1-201ENST00000443768 1479 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HOXC5Q00444 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.65□□□□□ -2.15
HOXC5Q00444 AL589826.1-201ENST00000340697 249 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 SNORA23-201ENST00000365128 182 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 MIR9-3-201ENST00000385084 90 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 MIR888-201ENST00000401186 77 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 RNU2-42P-201ENST00000410697 113 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 BTF3P8-201ENST00000414577 526 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 ZNF90P2-204ENST00000419323 1075 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 EIF4EP4-201ENST00000424916 578 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.65□□□□□ -2.15
HOXC5Q00444 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.65□□□□□ -2.15
HOXC5Q00444 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.65□□□□□ -2.15
HOXC5Q00444 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.65□□□□□ -2.15
HOXC5Q00444 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.65□□□□□ -2.15
HOXC5Q00444 AC244505.3-201ENST00000454598 187 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.65□□□□□ -2.15
HOXC5Q00444 AC034222.1-201ENST00000494052 532 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.65□□□□□ -2.15
HOXC5Q00444 HSPE1P18-201ENST00000517602 280 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 HSPA8P13-201ENST00000523715 472 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.65□□□□□ -2.15
HOXC5Q00444 CYB5AP5-201ENST00000549779 389 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.65□□□□□ -2.15
HOXC5Q00444 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.65□□□□□ -2.15
HOXC5Q00444 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms