Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RAE1P78406 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RAE1P78406 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RAE1P78406 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RAE1P78406 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.49□□□□□ -1.85
RAE1P78406 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RAE1P78406 RNU6-82P-201ENST00000363970 107 ntBASIC3.49□□□□□ -1.85
RAE1P78406 RNA5SP42-201ENST00000364278 115 ntBASIC3.49□□□□□ -1.85
RAE1P78406 MIR3074-201ENST00000384885 81 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AL139397.2-201ENST00000404529 772 ntBASIC3.49□□□□□ -1.85
RAE1P78406 MTHFD2P2-201ENST00000407725 247 ntBASIC3.49□□□□□ -1.85
RAE1P78406 PDCL2P1-201ENST00000419302 352 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AC002075.2-201ENST00000425207 252 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.49□□□□□ -1.85
RAE1P78406 VDAC1P3-201ENST00000434069 851 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.49□□□□□ -1.85
RAE1P78406 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.49□□□□□ -1.85
RAE1P78406 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.49□□□□□ -1.85
RAE1P78406 AC093019.1-201ENST00000443135 252 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AC004801.2-202ENST00000463559 283 ntBASIC3.49□□□□□ -1.85
RAE1P78406 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.49□□□□□ -1.85
RAE1P78406 MTND3P22-201ENST00000510932 243 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.49□□□□□ -1.85
RAE1P78406 BTF3P12-201ENST00000519620 469 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AC107953.1-201ENST00000522216 297 ntBASIC3.49□□□□□ -1.85
RAE1P78406 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.49□□□□□ -1.85
RAE1P78406 MIR5187-201ENST00000583479 76 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AC244505.7-201ENST00000599675 272 ntBASIC3.49□□□□□ -1.85
RAE1P78406 C8orf59P2-201ENST00000603441 271 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AC020910.2-201ENST00000603635 610 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AC021646.1-201ENST00000605469 484 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AC009570.1-201ENST00000609599 745 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AC093913.1-201ENST00000614178 329 ntBASIC3.49□□□□□ -1.85
RAE1P78406 uc_338.32-201ENST00000615087 172 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AC090132.2-201ENST00000615881 347 ntBASIC3.49□□□□□ -1.85
RAE1P78406 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.49□□□□□ -1.85
RAE1P78406 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.49□□□□□ -1.85
RAE1P78406 AP000553.6-201ENST00000641242 118 ntBASIC3.49□□□□□ -1.85
RAE1P78406 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RAE1P78406 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RAE1P78406 AC121333.1-201ENST00000567488 2709 ntBASIC3.49□□□□□ -1.85
RAE1P78406 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.49□□□□□ -1.85
RAE1P78406 AC007656.2-201ENST00000624902 4547 ntBASIC3.49□□□□□ -1.85
RAE1P78406 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RAE1P78406 MAPK10-373ENST00000641983 6772 ntBASIC3.49□□□□□ -1.85
RAE1P78406 AP004289.2-201ENST00000444413 1457 ntBASIC3.48□□□□□ -1.85
RAE1P78406 AC073544.1-201ENST00000600110 1595 ntBASIC3.48□□□□□ -1.85
RAE1P78406 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RAE1P78406 Y_RNA.142-201ENST00000363491 102 ntBASIC3.48□□□□□ -1.85
RAE1P78406 RNA5SP515-201ENST00000364570 118 ntBASIC3.48□□□□□ -1.85
RAE1P78406 Y_RNA.378-201ENST00000365652 113 ntBASIC3.48□□□□□ -1.85
RAE1P78406 RN7SKP32-201ENST00000410167 303 ntBASIC3.48□□□□□ -1.85
RAE1P78406 RNA5SP111-201ENST00000411386 101 ntBASIC3.48□□□□□ -1.85
RAE1P78406 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.48□□□□□ -1.85
RAE1P78406 Z85995.1-201ENST00000415547 335 ntBASIC3.48□□□□□ -1.85
RAE1P78406 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.48□□□□□ -1.85
RAE1P78406 AL160275.3-201ENST00000423876 471 ntBASIC3.48□□□□□ -1.85
RAE1P78406 RPL35AP12-201ENST00000425362 338 ntBASIC3.48□□□□□ -1.85
RAE1P78406 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.48□□□□□ -1.85
RAE1P78406 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.48□□□□□ -1.85
RAE1P78406 RPS29P31-201ENST00000446147 164 ntBASIC3.48□□□□□ -1.85
RAE1P78406 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.48□□□□□ -1.85
RAE1P78406 RPS15AP27-201ENST00000449183 343 ntBASIC3.48□□□□□ -1.85
RAE1P78406 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.48□□□□□ -1.85
RAE1P78406 AC103987.1-201ENST00000473394 348 ntBASIC3.48□□□□□ -1.85
RAE1P78406 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.48□□□□□ -1.85
RAE1P78406 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.48□□□□□ -1.85
RAE1P78406 FAM206BP-201ENST00000510179 541 ntBASIC3.48□□□□□ -1.85
RAE1P78406 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.48□□□□□ -1.85
RAE1P78406 APOOP4-201ENST00000513530 597 ntBASIC3.48□□□□□ -1.85
RAE1P78406 RN7SKP21-201ENST00000516503 220 ntBASIC3.48□□□□□ -1.85
RAE1P78406 RNU6-1256P-201ENST00000516539 103 ntBASIC3.48□□□□□ -1.85
RAE1P78406 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.48□□□□□ -1.85
RAE1P78406 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.48□□□□□ -1.85
RAE1P78406 AC090281.1-201ENST00000523019 276 ntBASIC3.48□□□□□ -1.85
RAE1P78406 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.48□□□□□ -1.85
RAE1P78406 OR5D17P-201ENST00000531492 978 ntBASIC3.48□□□□□ -1.85
RAE1P78406 TOMM20P2-201ENST00000540082 421 ntBASIC3.48□□□□□ -1.85
RAE1P78406 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.48□□□□□ -1.85
RAE1P78406 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.48□□□□□ -1.85
RAE1P78406 HSPE1P5-201ENST00000561489 272 ntBASIC3.48□□□□□ -1.85
RAE1P78406 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.48□□□□□ -1.85
RAE1P78406 MIR4738-201ENST00000579134 87 ntBASIC3.48□□□□□ -1.85
RAE1P78406 BNIP3P25-201ENST00000596023 559 ntBASIC3.48□□□□□ -1.85
RAE1P78406 VN1R80P-201ENST00000597126 338 ntBASIC3.48□□□□□ -1.85
RAE1P78406 AC007687.1-201ENST00000602704 304 ntBASIC3.48□□□□□ -1.85
RAE1P78406 AC107294.1-201ENST00000609524 467 ntBASIC3.48□□□□□ -1.85
RAE1P78406 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RAE1P78406 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.48□□□□□ -1.85
RAE1P78406 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.48□□□□□ -1.85
RAE1P78406 AL732372.2-225ENST00000642124 456 ntBASIC3.48□□□□□ -1.85
RAE1P78406 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RAE1P78406 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RAE1P78406 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RAE1P78406 MTND4P35-201ENST00000604257 1375 ntBASIC3.48□□□□□ -1.85
RAE1P78406 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RAE1P78406 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RAE1P78406 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RAE1P78406 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.47□□□□□ -1.85
RAE1P78406 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms