Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC097713.2-201ENST00000430199 356 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AC010153.1-201ENST00000432862 727 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AL353705.1-201ENST00000433468 480 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH13P55290 UQCRHP3-201ENST00000451503 251 ntBASIC3.04□□□□□ -1.92
CDH13P55290 ELOCP23-201ENST00000452014 332 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH13P55290 AC007182.2-201ENST00000489251 402 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AC138853.1-201ENST00000503549 823 ntBASIC3.04□□□□□ -1.92
CDH13P55290 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH13P55290 AC079140.3-201ENST00000511111 550 ntBASIC3.04□□□□□ -1.92
CDH13P55290 DUXAP2-201ENST00000519198 589 ntBASIC3.04□□□□□ -1.92
CDH13P55290 HMGB1P41-201ENST00000520234 440 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH13P55290 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH13P55290 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH13P55290 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH13P55290 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH13P55290 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.04□□□□□ -1.92
CDH13P55290 MIR4528-201ENST00000577763 90 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AC138932.5-201ENST00000617759 563 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AL589994.2-201ENST00000621124 579 ntBASIC3.04□□□□□ -1.92
CDH13P55290 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH13P55290 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH13P55290 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CDH13P55290 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH13P55290 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH13P55290 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH13P55290 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH13P55290 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH13P55290 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH13P55290 RNU6-198P-201ENST00000384258 104 ntBASIC3.03□□□□□ -1.92
CDH13P55290 RNU6-39P-201ENST00000384344 107 ntBASIC3.03□□□□□ -1.92
CDH13P55290 MIR449B-201ENST00000384995 97 ntBASIC3.03□□□□□ -1.92
CDH13P55290 MIR888-201ENST00000401186 77 ntBASIC3.03□□□□□ -1.92
CDH13P55290 AL354719.1-201ENST00000406535 843 ntBASIC3.03□□□□□ -1.92
CDH13P55290 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.03□□□□□ -1.92
CDH13P55290 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH13P55290 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH13P55290 PIGFP2-201ENST00000421400 651 ntBASIC3.03□□□□□ -1.92
CDH13P55290 HSPE1P1-201ENST00000421494 318 ntBASIC3.03□□□□□ -1.92
CDH13P55290 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH13P55290 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.03□□□□□ -1.92
CDH13P55290 AL159987.2-201ENST00000432754 307 ntBASIC3.03□□□□□ -1.92
CDH13P55290 MTCO3P5-201ENST00000433620 714 ntBASIC3.03□□□□□ -1.92
CDH13P55290 AL714022.1-201ENST00000439897 151 ntBASIC3.03□□□□□ -1.92
CDH13P55290 RPS24P13-201ENST00000442520 397 ntBASIC3.03□□□□□ -1.92
CDH13P55290 VN1R34P-201ENST00000447387 883 ntBASIC3.03□□□□□ -1.92
CDH13P55290 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH13P55290 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH13P55290 AL031183.1-201ENST00000457667 207 ntBASIC3.03□□□□□ -1.92
CDH13P55290 snoU13.28-201ENST00000459235 104 ntBASIC3.03□□□□□ -1.92
CDH13P55290 RPL39P36-201ENST00000490784 156 ntBASIC3.03□□□□□ -1.92
CDH13P55290 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH13P55290 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH13P55290 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH13P55290 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH13P55290 RNA5SP471-201ENST00000516971 106 ntBASIC3.03□□□□□ -1.92
CDH13P55290 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH13P55290 DNAJC8P1-201ENST00000554535 372 ntBASIC3.03□□□□□ -1.92
CDH13P55290 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH13P55290 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH13P55290 AL161734.1-201ENST00000609720 557 ntBASIC3.03□□□□□ -1.92
CDH13P55290 MTND5P42-201ENST00000637720 498 ntBASIC3.03□□□□□ -1.92
CDH13P55290 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH13P55290 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH13P55290 API5P2-201ENST00000397055 1498 ntBASIC3.03□□□□□ -1.93
CDH13P55290 AC091564.4-201ENST00000533934 2194 ntBASIC3.02□□□□□ -1.93
CDH13P55290 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CDH13P55290 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH13P55290 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDH13P55290 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDH13P55290 RNU6-799P-201ENST00000363567 107 ntBASIC3.02□□□□□ -1.93
CDH13P55290 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH13P55290 RNU6-946P-201ENST00000383878 107 ntBASIC3.02□□□□□ -1.93
CDH13P55290 RNU6-195P-201ENST00000411352 109 ntBASIC3.02□□□□□ -1.93
CDH13P55290 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH13P55290 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH13P55290 AC069157.1-201ENST00000421749 137 ntBASIC3.02□□□□□ -1.93
CDH13P55290 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH13P55290 SNRPEP9-201ENST00000436794 238 ntBASIC3.02□□□□□ -1.93
CDH13P55290 Z75741.1-201ENST00000446793 314 ntBASIC3.02□□□□□ -1.93
CDH13P55290 FABP5P15-201ENST00000453566 214 ntBASIC3.02□□□□□ -1.93
CDH13P55290 RNU7-23P-201ENST00000459465 62 ntBASIC3.02□□□□□ -1.93
CDH13P55290 AC004924.1-201ENST00000480160 781 ntBASIC3.02□□□□□ -1.93
CDH13P55290 RN7SL20P-201ENST00000488827 297 ntBASIC3.02□□□□□ -1.93
CDH13P55290 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH13P55290 RNU6-677P-201ENST00000516914 101 ntBASIC3.02□□□□□ -1.93
CDH13P55290 MTCO2P4-201ENST00000517968 247 ntBASIC3.02□□□□□ -1.93
CDH13P55290 AC090572.1-201ENST00000519251 160 ntBASIC3.02□□□□□ -1.93
CDH13P55290 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH13P55290 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH13P55290 AC024909.2-201ENST00000553035 286 ntBASIC3.02□□□□□ -1.93
CDH13P55290 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH13P55290 MIR4506-201ENST00000584693 77 ntBASIC3.02□□□□□ -1.93
CDH13P55290 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CDH13P55290 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH13P55290 MTCO1P12-201ENST00000414273 1543 ntBASIC3.02□□□□□ -1.93
CDH13P55290 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDH13P55290 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms