Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDH6P55285 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CDH6P55285 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDH6P55285 Y_RNA.500-201ENST00000384466 111 ntBASIC2.32□□□□□ -2.04
CDH6P55285 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
CDH6P55285 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.32□□□□□ -2.04
CDH6P55285 U3.37-201ENST00000408528 213 ntBASIC2.32□□□□□ -2.04
CDH6P55285 NDUFS5P4-201ENST00000412983 318 ntBASIC2.32□□□□□ -2.04
CDH6P55285 AF274854.1-201ENST00000413236 615 ntBASIC2.32□□□□□ -2.04
CDH6P55285 MTATP6P19-201ENST00000413797 659 ntBASIC2.32□□□□□ -2.04
CDH6P55285 BPY2DP-201ENST00000422208 265 ntBASIC2.32□□□□□ -2.04
CDH6P55285 HMGB1P9-201ENST00000429856 646 ntBASIC2.32□□□□□ -2.04
CDH6P55285 MED14P1-201ENST00000430517 648 ntBASIC2.32□□□□□ -2.04
CDH6P55285 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH6P55285 SNRPEP9-201ENST00000436794 238 ntBASIC2.32□□□□□ -2.04
CDH6P55285 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH6P55285 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH6P55285 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH6P55285 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH6P55285 RNU6-927P-201ENST00000516199 100 ntBASIC2.32□□□□□ -2.04
CDH6P55285 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH6P55285 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH6P55285 AC009712.1-201ENST00000564938 316 ntBASIC2.32□□□□□ -2.04
CDH6P55285 ISCA1P3-201ENST00000577104 373 ntBASIC2.32□□□□□ -2.04
CDH6P55285 AC069431.2-201ENST00000604149 1099 ntBASIC2.32□□□□□ -2.04
CDH6P55285 HMGB1P24-202ENST00000615653 685 ntBASIC2.32□□□□□ -2.04
CDH6P55285 AC116618.1-201ENST00000634617 774 ntBASIC2.32□□□□□ -2.04
CDH6P55285 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
CDH6P55285 MTND4P35-201ENST00000604257 1375 ntBASIC2.32□□□□□ -2.04
CDH6P55285 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDH6P55285 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH6P55285 AC006020.1-201ENST00000420179 1854 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AC005336.3-201ENST00000623833 2679 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AC080128.1-201ENST00000474389 1917 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AC110491.1-201ENST00000562191 2010 ntBASIC2.31□□□□□ -2.04
CDH6P55285 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH6P55285 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CDH6P55285 RNU5E-10P-201ENST00000363506 118 ntBASIC2.31□□□□□ -2.04
CDH6P55285 RNU6-1083P-201ENST00000384022 107 ntBASIC2.31□□□□□ -2.04
CDH6P55285 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
CDH6P55285 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.31□□□□□ -2.04
CDH6P55285 USP9YP33-201ENST00000412220 421 ntBASIC2.31□□□□□ -2.04
CDH6P55285 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH6P55285 MORF4L1P6-201ENST00000418771 268 ntBASIC2.31□□□□□ -2.04
CDH6P55285 USP12PX-201ENST00000432383 1057 ntBASIC2.31□□□□□ -2.04
CDH6P55285 USP9YP35-201ENST00000435696 412 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH6P55285 AC098831.1-201ENST00000440661 216 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AC008481.1-201ENST00000463278 396 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AC128713.1-201ENST00000471495 306 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AC108729.1-201ENST00000487812 947 ntBASIC2.31□□□□□ -2.04
CDH6P55285 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CDH6P55285 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH6P55285 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH6P55285 MTND5P13-201ENST00000513046 1079 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH6P55285 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH6P55285 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH6P55285 AC023538.1-201ENST00000534576 736 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AP002770.2-201ENST00000543613 532 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AL512310.1-201ENST00000548639 172 ntBASIC2.31□□□□□ -2.04
CDH6P55285 NACAP3-201ENST00000552100 481 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH6P55285 RPS3AP23-202ENST00000574601 686 ntBASIC2.31□□□□□ -2.04
CDH6P55285 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH6P55285 AP000403.1-201ENST00000603349 851 ntBASIC2.31□□□□□ -2.04
CDH6P55285 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDH6P55285 AL049777.1-201ENST00000622740 518 ntBASIC2.31□□□□□ -2.04
CDH6P55285 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH6P55285 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CDH6P55285 MTND4P27-201ENST00000450813 1354 ntBASIC2.31□□□□□ -2.04
CDH6P55285 AC004520.1-201ENST00000608362 1413 ntBASIC2.31□□□□□ -2.04
CDH6P55285 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH6P55285 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDH6P55285 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH6P55285 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDH6P55285 MIR449A-201ENST00000362113 91 ntBASIC2.3□□□□□ -2.04
CDH6P55285 Y_RNA.245-201ENST00000364493 95 ntBASIC2.3□□□□□ -2.04
CDH6P55285 ERHP2-201ENST00000402323 299 ntBASIC2.3□□□□□ -2.04
CDH6P55285 RNU4-72P-201ENST00000410754 173 ntBASIC2.3□□□□□ -2.04
CDH6P55285 RNU4-53P-201ENST00000410828 140 ntBASIC2.3□□□□□ -2.04
CDH6P55285 RNU6-1328P-201ENST00000410938 106 ntBASIC2.3□□□□□ -2.04
CDH6P55285 RPL17P12-201ENST00000413391 526 ntBASIC2.3□□□□□ -2.04
CDH6P55285 ELOCP14-201ENST00000428070 331 ntBASIC2.3□□□□□ -2.04
CDH6P55285 ELOCP7-201ENST00000439968 331 ntBASIC2.3□□□□□ -2.04
CDH6P55285 EEF1A1P39-201ENST00000440791 250 ntBASIC2.3□□□□□ -2.04
CDH6P55285 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH6P55285 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CDH6P55285 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH6P55285 TPT1P14-201ENST00000448018 505 ntBASIC2.3□□□□□ -2.04
CDH6P55285 RPL23AP49-201ENST00000492925 468 ntBASIC2.3□□□□□ -2.04
CDH6P55285 RPS27AP10-201ENST00000496103 208 ntBASIC2.3□□□□□ -2.04
CDH6P55285 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.3□□□□□ -2.04
CDH6P55285 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.3□□□□□ -2.04
CDH6P55285 RNU6-390P-201ENST00000516259 103 ntBASIC2.3□□□□□ -2.04
CDH6P55285 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH6P55285 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH6P55285 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH6P55285 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH6P55285 AC060771.1-201ENST00000582031 164 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms