Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.86□□□□□ -1.95
VCPP55072 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VCPP55072 AP004247.1-201ENST00000531556 1289 ntBASIC2.86□□□□□ -1.95
VCPP55072 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.86□□□□□ -1.95
VCPP55072 AL158211.1-201ENST00000566763 763 ntBASIC2.86□□□□□ -1.95
VCPP55072 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.86□□□□□ -1.95
VCPP55072 MIR544B-201ENST00000582372 78 ntBASIC2.86□□□□□ -1.95
VCPP55072 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
VCPP55072 AL353778.1-201ENST00000603149 408 ntBASIC2.86□□□□□ -1.95
VCPP55072 AC131159.1-201ENST00000621854 213 ntBASIC2.86□□□□□ -1.95
VCPP55072 AC008443.7-201ENST00000622195 246 ntBASIC2.86□□□□□ -1.95
VCPP55072 AC007671.2-201ENST00000637344 619 ntBASIC2.86□□□□□ -1.95
VCPP55072 AC006378.2-201ENST00000623178 2476 ntBASIC2.86□□□□□ -1.95
VCPP55072 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VCPP55072 AC008669.1-201ENST00000565823 2178 ntBASIC2.85□□□□□ -1.95
VCPP55072 HSPA8P4-201ENST00000511877 1920 ntBASIC2.85□□□□□ -1.95
VCPP55072 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.85□□□□□ -1.95
VCPP55072 RNA5SP289-201ENST00000362332 137 ntBASIC2.85□□□□□ -1.95
VCPP55072 RNU5A-1-201ENST00000362698 116 ntBASIC2.85□□□□□ -1.95
VCPP55072 RNU6-270P-201ENST00000364131 105 ntBASIC2.85□□□□□ -1.95
VCPP55072 RNU6-637P-201ENST00000384050 107 ntBASIC2.85□□□□□ -1.95
VCPP55072 RNU6-76P-201ENST00000384060 104 ntBASIC2.85□□□□□ -1.95
VCPP55072 MIR627-201ENST00000384979 97 ntBASIC2.85□□□□□ -1.95
VCPP55072 U3.20-201ENST00000390909 217 ntBASIC2.85□□□□□ -1.95
VCPP55072 AL096701.2-201ENST00000416920 238 ntBASIC2.85□□□□□ -1.95
VCPP55072 PPP1R11P2-201ENST00000423543 382 ntBASIC2.85□□□□□ -1.95
VCPP55072 AC009414.1-201ENST00000427200 443 ntBASIC2.85□□□□□ -1.95
VCPP55072 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.85□□□□□ -1.95
VCPP55072 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.85□□□□□ -1.95
VCPP55072 AC009237.8-201ENST00000445492 379 ntBASIC2.85□□□□□ -1.95
VCPP55072 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.85□□□□□ -1.95
VCPP55072 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.85□□□□□ -1.95
VCPP55072 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.85□□□□□ -1.95
VCPP55072 RNU6-420P-201ENST00000458780 107 ntBASIC2.85□□□□□ -1.95
VCPP55072 RPS27AP9-201ENST00000477681 438 ntBASIC2.85□□□□□ -1.95
VCPP55072 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.85□□□□□ -1.95
VCPP55072 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.85□□□□□ -1.95
VCPP55072 RPPH1-2P-201ENST00000516688 293 ntBASIC2.85□□□□□ -1.95
VCPP55072 SNORA31.22-201ENST00000517204 135 ntBASIC2.85□□□□□ -1.95
VCPP55072 AC109329.2-201ENST00000519658 482 ntBASIC2.85□□□□□ -1.95
VCPP55072 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VCPP55072 AC013828.2-201ENST00000532487 235 ntBASIC2.85□□□□□ -1.95
VCPP55072 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.85□□□□□ -1.95
VCPP55072 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.85□□□□□ -1.95
VCPP55072 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.85□□□□□ -1.95
VCPP55072 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.85□□□□□ -1.95
VCPP55072 AC103710.4-201ENST00000609301 899 ntBASIC2.85□□□□□ -1.95
VCPP55072 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.85□□□□□ -1.95
VCPP55072 OR5H6-203ENST00000642105 978 ntBASIC2.85□□□□□ -1.95
VCPP55072 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VCPP55072 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.85□□□□□ -1.95
VCPP55072 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VCPP55072 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
VCPP55072 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
VCPP55072 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
VCPP55072 MTND4P16-201ENST00000466108 1367 ntBASIC2.85□□□□□ -1.95
VCPP55072 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
VCPP55072 AC005832.2-201ENST00000538921 1430 ntBASIC2.85□□□□□ -1.95
VCPP55072 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
VCPP55072 AC009902.3-201ENST00000606235 2172 ntBASIC2.84□□□□□ -1.95
VCPP55072 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VCPP55072 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VCPP55072 RNU5E-8P-201ENST00000363502 116 ntBASIC2.84□□□□□ -1.95
VCPP55072 Y_RNA.164-201ENST00000363709 102 ntBASIC2.84□□□□□ -1.95
VCPP55072 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VCPP55072 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.84□□□□□ -1.95
VCPP55072 TPMTP3-201ENST00000411928 735 ntBASIC2.84□□□□□ -1.95
VCPP55072 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.84□□□□□ -1.95
VCPP55072 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.84□□□□□ -1.95
VCPP55072 FAM103A2P-201ENST00000444122 354 ntBASIC2.84□□□□□ -1.95
VCPP55072 ATG12P2-201ENST00000456830 416 ntBASIC2.84□□□□□ -1.95
VCPP55072 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.84□□□□□ -1.95
VCPP55072 AC133134.1-201ENST00000466800 359 ntBASIC2.84□□□□□ -1.95
VCPP55072 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.84□□□□□ -1.95
VCPP55072 RN7SKP40-201ENST00000517211 242 ntBASIC2.84□□□□□ -1.95
VCPP55072 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.84□□□□□ -1.95
VCPP55072 OR11H5P-201ENST00000554039 926 ntBASIC2.84□□□□□ -1.95
VCPP55072 AC007954.1-201ENST00000554198 494 ntBASIC2.84□□□□□ -1.95
VCPP55072 AMZ2P1-203ENST00000565833 850 ntBASIC2.84□□□□□ -1.95
VCPP55072 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VCPP55072 AL139344.1-201ENST00000605228 195 ntBASIC2.84□□□□□ -1.95
VCPP55072 BCRP9-201ENST00000605312 388 ntBASIC2.84□□□□□ -1.95
VCPP55072 AL136363.1-201ENST00000605349 337 ntBASIC2.84□□□□□ -1.95
VCPP55072 AC004067.1-201ENST00000608733 700 ntBASIC2.84□□□□□ -1.95
VCPP55072 AC090132.2-201ENST00000615881 347 ntBASIC2.84□□□□□ -1.95
VCPP55072 AC009268.2-201ENST00000621925 457 ntBASIC2.84□□□□□ -1.95
VCPP55072 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.84□□□□□ -1.96
VCPP55072 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.84□□□□□ -1.96
VCPP55072 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
VCPP55072 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VCPP55072 RNU6-660P-201ENST00000364566 109 ntBASIC2.83□□□□□ -1.96
VCPP55072 RNU6-769P-201ENST00000384407 104 ntBASIC2.83□□□□□ -1.96
VCPP55072 AL139039.1-201ENST00000401900 692 ntBASIC2.83□□□□□ -1.96
VCPP55072 AL356057.3-201ENST00000402607 340 ntBASIC2.83□□□□□ -1.96
VCPP55072 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.83□□□□□ -1.96
VCPP55072 MTND1P21-201ENST00000412991 285 ntBASIC2.83□□□□□ -1.96
VCPP55072 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.83□□□□□ -1.96
VCPP55072 RPL23AP39-201ENST00000415533 405 ntBASIC2.83□□□□□ -1.96
VCPP55072 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.83□□□□□ -1.96
VCPP55072 MTND5P25-201ENST00000430499 799 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms