Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC027514.1-201ENST00000588561 1603 ntBASIC3.87□□□□□ -1.79
TM4SF4P48230 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TM4SF4P48230 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.86□□□□□ -1.79
TM4SF4P48230 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TM4SF4P48230 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TM4SF4P48230 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TM4SF4P48230 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.86□□□□□ -1.79
TM4SF4P48230 UBE2L2-201ENST00000254302 429 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 Y_RNA.22-201ENST00000362492 102 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 RNU6-288P-201ENST00000363690 104 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 MIR1-2-201ENST00000384961 85 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.86□□□□□ -1.79
TM4SF4P48230 AC080125.1-201ENST00000414888 684 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 Z85995.1-201ENST00000415547 335 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 AL591212.2-201ENST00000433923 257 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 DNAJC19P4-201ENST00000440115 345 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 HMGB3P11-201ENST00000440127 604 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.86□□□□□ -1.79
TM4SF4P48230 RN7SL863P-201ENST00000462370 296 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 SNORA31.3-201ENST00000516029 96 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 RNU6-1282P-201ENST00000516735 96 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 RANP3-201ENST00000530970 276 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TM4SF4P48230 AC011602.1-201ENST00000546484 331 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 ADI1P3-201ENST00000549509 470 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.86□□□□□ -1.79
TM4SF4P48230 AL158032.1-201ENST00000605401 106 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 AC015813.4-201ENST00000610469 179 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TM4SF4P48230 PLCE1P1-201ENST00000622094 305 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 AC124864.2-201ENST00000624736 186 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 MTND1P37-201ENST00000636562 264 ntBASIC3.86□□□□□ -1.79
TM4SF4P48230 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TM4SF4P48230 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.86□□□□□ -1.79
TM4SF4P48230 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TM4SF4P48230 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TM4SF4P48230 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.86□□□□□ -1.79
TM4SF4P48230 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.85□□□□□ -1.79
TM4SF4P48230 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.85□□□□□ -1.79
TM4SF4P48230 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM4SF4P48230 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM4SF4P48230 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM4SF4P48230 RNU1-108P-201ENST00000362556 161 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 RNA5SP42-201ENST00000364278 115 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.85□□□□□ -1.79
TM4SF4P48230 MIR454-201ENST00000390180 115 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 MTCO3P40-201ENST00000392516 676 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 RNU2-9P-201ENST00000410194 145 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 AMD1P2-201ENST00000412936 992 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TM4SF4P48230 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.85□□□□□ -1.79
TM4SF4P48230 AC004552.1-201ENST00000419089 348 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 AL139413.1-201ENST00000421309 217 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 OOSP1P1-201ENST00000423265 274 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.85□□□□□ -1.79
TM4SF4P48230 ZNF863P-201ENST00000426746 417 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 CALM2P2-201ENST00000428512 440 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 BNIP3P2-201ENST00000441221 577 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 DDX3P2-201ENST00000446138 111 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.85□□□□□ -1.79
TM4SF4P48230 RNU7-182P-201ENST00000459009 62 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 RNU7-170P-201ENST00000459303 61 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 SRRM1P2-201ENST00000464531 1192 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.85□□□□□ -1.79
TM4SF4P48230 AP001893.2-201ENST00000526949 202 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 OR5AL2P-201ENST00000532185 920 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 AP003034.1-201ENST00000534621 422 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 AC016957.1-201ENST00000534895 309 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.85□□□□□ -1.79
TM4SF4P48230 ZNF519P2-201ENST00000557032 169 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 HMGB1P14-201ENST00000557424 591 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 BNIP3P9-201ENST00000603714 553 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 AC080078.2-201ENST00000603766 501 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 AC013562.2-201ENST00000611632 603 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 AC025034.2-201ENST00000623264 286 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 CR381653.2-201ENST00000624041 768 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.85□□□□□ -1.79
TM4SF4P48230 MTND5P42-201ENST00000637720 498 ntBASIC3.85□□□□□ -1.79
TM4SF4P48230 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM4SF4P48230 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM4SF4P48230 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TM4SF4P48230 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM4SF4P48230 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TM4SF4P48230 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.84□□□□□ -1.79
TM4SF4P48230 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
TM4SF4P48230 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
TM4SF4P48230 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.84□□□□□ -1.79
TM4SF4P48230 Y_RNA.6-201ENST00000362350 114 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 SNORA62.1-201ENST00000364287 154 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 RNU4-48P-201ENST00000365559 182 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 Y_RNA.481-201ENST00000384373 102 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TM4SF4P48230 MTCO1P21-201ENST00000416634 589 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TM4SF4P48230 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.84□□□□□ -1.79
TM4SF4P48230 AC027673.1-201ENST00000456245 405 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 RPL9P33-201ENST00000484311 566 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.84□□□□□ -1.79
TM4SF4P48230 RPS15AP34-201ENST00000487776 387 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms