Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.51□□□□□ -2.01
SSR1P43307 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.51□□□□□ -2.01
SSR1P43307 AC090186.1-201ENST00000605991 572 ntBASIC2.51□□□□□ -2.01
SSR1P43307 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.51□□□□□ -2.01
SSR1P43307 AL133445.2-201ENST00000611191 527 ntBASIC2.51□□□□□ -2.01
SSR1P43307 SDR42E1P2-201ENST00000614861 481 ntBASIC2.51□□□□□ -2.01
SSR1P43307 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.51□□□□□ -2.01
SSR1P43307 SDR42E1P4-201ENST00000620894 481 ntBASIC2.51□□□□□ -2.01
SSR1P43307 AC007998.5-201ENST00000622938 237 ntBASIC2.51□□□□□ -2.01
SSR1P43307 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SSR1P43307 ZNF29P-201ENST00000225587 168 ntBASIC2.5□□□□□ -2.01
SSR1P43307 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSR1P43307 RNU6-621P-201ENST00000364752 109 ntBASIC2.5□□□□□ -2.01
SSR1P43307 RNU6-741P-201ENST00000383889 107 ntBASIC2.5□□□□□ -2.01
SSR1P43307 AL359511.1-201ENST00000402970 211 ntBASIC2.5□□□□□ -2.01
SSR1P43307 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.5□□□□□ -2.01
SSR1P43307 ZNF863P-201ENST00000426746 417 ntBASIC2.5□□□□□ -2.01
SSR1P43307 AP000542.1-201ENST00000448473 371 ntBASIC2.5□□□□□ -2.01
SSR1P43307 RPL36AP51-201ENST00000487216 318 ntBASIC2.5□□□□□ -2.01
SSR1P43307 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.5□□□□□ -2.01
SSR1P43307 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.5□□□□□ -2.01
SSR1P43307 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.5□□□□□ -2.01
SSR1P43307 AC023141.11-201ENST00000508864 202 ntBASIC2.5□□□□□ -2.01
SSR1P43307 AC024589.1-201ENST00000512207 263 ntBASIC2.5□□□□□ -2.01
SSR1P43307 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.5□□□□□ -2.01
SSR1P43307 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSR1P43307 RPL7P20-201ENST00000520308 745 ntBASIC2.5□□□□□ -2.01
SSR1P43307 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.5□□□□□ -2.01
SSR1P43307 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.5□□□□□ -2.01
SSR1P43307 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.5□□□□□ -2.01
SSR1P43307 MIR4448-201ENST00000584360 86 ntBASIC2.5□□□□□ -2.01
SSR1P43307 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SSR1P43307 CCT4P2-201ENST00000233836 1548 ntBASIC2.5□□□□□ -2.01
SSR1P43307 MTND4P1-201ENST00000457501 1466 ntBASIC2.5□□□□□ -2.01
SSR1P43307 AC131280.1-202ENST00000624067 4211 ntBASIC2.5□□□□□ -2.01
SSR1P43307 MTND4P27-201ENST00000450813 1354 ntBASIC2.49□□□□□ -2.01
SSR1P43307 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SSR1P43307 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSR1P43307 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SSR1P43307 RNA5SP37-201ENST00000365420 130 ntBASIC2.49□□□□□ -2.01
SSR1P43307 RNU6-432P-201ENST00000384196 109 ntBASIC2.49□□□□□ -2.01
SSR1P43307 MIR518C-201ENST00000384822 101 ntBASIC2.49□□□□□ -2.01
SSR1P43307 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SSR1P43307 TXNP7-201ENST00000406296 293 ntBASIC2.49□□□□□ -2.01
SSR1P43307 CCNG1P1-201ENST00000406783 885 ntBASIC2.49□□□□□ -2.01
SSR1P43307 RNU2-33P-201ENST00000410344 192 ntBASIC2.49□□□□□ -2.01
SSR1P43307 RNU6-1328P-201ENST00000410938 106 ntBASIC2.49□□□□□ -2.01
SSR1P43307 MTATP6P20-201ENST00000414147 562 ntBASIC2.49□□□□□ -2.01
SSR1P43307 AL445669.1-201ENST00000426743 755 ntBASIC2.49□□□□□ -2.01
SSR1P43307 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.49□□□□□ -2.01
SSR1P43307 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.49□□□□□ -2.01
SSR1P43307 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.49□□□□□ -2.01
SSR1P43307 AC093281.2-201ENST00000510153 597 ntBASIC2.49□□□□□ -2.01
SSR1P43307 AC109445.1-201ENST00000512356 383 ntBASIC2.49□□□□□ -2.01
SSR1P43307 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.49□□□□□ -2.01
SSR1P43307 OR5AQ1P-201ENST00000527596 927 ntBASIC2.49□□□□□ -2.01
SSR1P43307 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.49□□□□□ -2.01
SSR1P43307 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.49□□□□□ -2.01
SSR1P43307 AC234778.2-201ENST00000566241 354 ntBASIC2.49□□□□□ -2.01
SSR1P43307 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.49□□□□□ -2.01
SSR1P43307 RNU4-5P-201ENST00000607255 135 ntBASIC2.49□□□□□ -2.01
SSR1P43307 AP003485.2-201ENST00000623636 610 ntBASIC2.49□□□□□ -2.01
SSR1P43307 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSR1P43307 CKAP2P1-201ENST00000555477 2049 ntBASIC2.48□□□□□ -2.01
SSR1P43307 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSR1P43307 RPL21P132-201ENST00000331267 462 ntBASIC2.48□□□□□ -2.01
SSR1P43307 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.48□□□□□ -2.01
SSR1P43307 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.48□□□□□ -2.01
SSR1P43307 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.48□□□□□ -2.01
SSR1P43307 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.48□□□□□ -2.01
SSR1P43307 PTENP1-201ENST00000447117 1215 ntBASIC2.48□□□□□ -2.01
SSR1P43307 AL009048.1-201ENST00000450437 298 ntBASIC2.48□□□□□ -2.01
SSR1P43307 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.48□□□□□ -2.01
SSR1P43307 AL121769.1-201ENST00000469473 401 ntBASIC2.48□□□□□ -2.01
SSR1P43307 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.48□□□□□ -2.01
SSR1P43307 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SSR1P43307 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.48□□□□□ -2.01
SSR1P43307 AC008413.1-201ENST00000511864 177 ntBASIC2.48□□□□□ -2.01
SSR1P43307 MTCO2P15-201ENST00000532655 656 ntBASIC2.48□□□□□ -2.01
SSR1P43307 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.48□□□□□ -2.01
SSR1P43307 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.48□□□□□ -2.01
SSR1P43307 AC091057.3-201ENST00000602684 733 ntBASIC2.48□□□□□ -2.01
SSR1P43307 AL160281.1-201ENST00000605307 311 ntBASIC2.48□□□□□ -2.01
SSR1P43307 FTX_3.1-201ENST00000610451 147 ntBASIC2.48□□□□□ -2.01
SSR1P43307 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.48□□□□□ -2.01
SSR1P43307 AC109809.1-201ENST00000619665 545 ntBASIC2.48□□□□□ -2.01
SSR1P43307 AC091932.3-201ENST00000624223 323 ntBASIC2.48□□□□□ -2.01
SSR1P43307 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
SSR1P43307 MIRLET7G-201ENST00000362280 84 ntBASIC2.47□□□□□ -2.01
SSR1P43307 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.47□□□□□ -2.01
SSR1P43307 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSR1P43307 RNU6-220P-201ENST00000390919 107 ntBASIC2.47□□□□□ -2.01
SSR1P43307 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSR1P43307 AL139397.2-201ENST00000404529 772 ntBASIC2.47□□□□□ -2.01
SSR1P43307 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.47□□□□□ -2.01
SSR1P43307 NANOGP5-201ENST00000424456 877 ntBASIC2.47□□□□□ -2.01
SSR1P43307 MYL8P-204ENST00000431574 518 ntBASIC2.47□□□□□ -2.01
SSR1P43307 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.47□□□□□ -2.01
SSR1P43307 RPS15AP5-201ENST00000436276 388 ntBASIC2.47□□□□□ -2.01
SSR1P43307 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms