Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AP000776.1-201ENST00000530032 1663 ntBASIC1□□□□□ -2.25
SNCAP37840 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1□□□□□ -2.25
SNCAP37840 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
SNCAP37840 RNU6-939P-201ENST00000384634 107 ntBASIC0.99□□□□□ -2.25
SNCAP37840 AL021407.1-201ENST00000404531 386 ntBASIC0.99□□□□□ -2.25
SNCAP37840 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.99□□□□□ -2.25
SNCAP37840 AL512844.2-201ENST00000433990 593 ntBASIC0.99□□□□□ -2.25
SNCAP37840 HMGB1P31-201ENST00000437242 427 ntBASIC0.99□□□□□ -2.25
SNCAP37840 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.99□□□□□ -2.25
SNCAP37840 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
SNCAP37840 FAM206BP-201ENST00000510179 541 ntBASIC0.99□□□□□ -2.25
SNCAP37840 AC117532.1-201ENST00000514638 323 ntBASIC0.99□□□□□ -2.25
SNCAP37840 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.99□□□□□ -2.25
SNCAP37840 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.99□□□□□ -2.25
SNCAP37840 AP003033.1-201ENST00000527244 415 ntBASIC0.99□□□□□ -2.25
SNCAP37840 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.99□□□□□ -2.25
SNCAP37840 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.99□□□□□ -2.25
SNCAP37840 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.99□□□□□ -2.25
SNCAP37840 AC097504.2-201ENST00000608088 454 ntBASIC0.99□□□□□ -2.25
SNCAP37840 AL512598.1-201ENST00000610158 273 ntBASIC0.99□□□□□ -2.25
SNCAP37840 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
SNCAP37840 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.98□□□□□ -2.25
SNCAP37840 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.98□□□□□ -2.25
SNCAP37840 AL049641.1-201ENST00000441055 1948 ntBASIC0.98□□□□□ -2.25
SNCAP37840 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SNCAP37840 RNU6-76P-201ENST00000384060 104 ntBASIC0.98□□□□□ -2.25
SNCAP37840 RNU6-750P-201ENST00000390946 107 ntBASIC0.98□□□□□ -2.25
SNCAP37840 AL356421.1-201ENST00000403255 413 ntBASIC0.98□□□□□ -2.25
SNCAP37840 NDUFS5P1-201ENST00000405668 289 ntBASIC0.98□□□□□ -2.25
SNCAP37840 RNU4-74P-201ENST00000411280 161 ntBASIC0.98□□□□□ -2.25
SNCAP37840 AC023141.4-201ENST00000412031 328 ntBASIC0.98□□□□□ -2.25
SNCAP37840 AC233981.1-201ENST00000423224 461 ntBASIC0.98□□□□□ -2.25
SNCAP37840 MTND2P29-201ENST00000438595 412 ntBASIC0.98□□□□□ -2.25
SNCAP37840 RPS29P28-201ENST00000446439 141 ntBASIC0.98□□□□□ -2.25
SNCAP37840 AC008379.1-201ENST00000463655 464 ntBASIC0.98□□□□□ -2.25
SNCAP37840 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.98□□□□□ -2.25
SNCAP37840 HMGB1P36-201ENST00000487709 576 ntBASIC0.98□□□□□ -2.25
SNCAP37840 AC107953.1-201ENST00000522216 297 ntBASIC0.98□□□□□ -2.25
SNCAP37840 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
SNCAP37840 TRAV11-201ENST00000539512 339 ntBASIC0.98□□□□□ -2.25
SNCAP37840 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.98□□□□□ -2.25
SNCAP37840 IMMP1LP2-201ENST00000552954 492 ntBASIC0.98□□□□□ -2.25
SNCAP37840 DNAJC19P9-201ENST00000555084 351 ntBASIC0.98□□□□□ -2.25
SNCAP37840 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.98□□□□□ -2.25
SNCAP37840 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.98□□□□□ -2.25
SNCAP37840 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.98□□□□□ -2.25
SNCAP37840 MIR3945-201ENST00000581853 98 ntBASIC0.98□□□□□ -2.25
SNCAP37840 HMGN2P15-201ENST00000585707 270 ntBASIC0.98□□□□□ -2.25
SNCAP37840 AC025811.1-201ENST00000604312 472 ntBASIC0.98□□□□□ -2.25
SNCAP37840 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.98□□□□□ -2.25
SNCAP37840 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.98□□□□□ -2.25
SNCAP37840 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.98□□□□□ -2.25
SNCAP37840 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SNCAP37840 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.97□□□□□ -2.25
SNCAP37840 RNU6-1155P-201ENST00000363554 107 ntBASIC0.97□□□□□ -2.25
SNCAP37840 SNORA22-201ENST00000383907 134 ntBASIC0.97□□□□□ -2.25
SNCAP37840 SNORA22C-201ENST00000384614 134 ntBASIC0.97□□□□□ -2.25
SNCAP37840 MIR218-1-201ENST00000384999 110 ntBASIC0.97□□□□□ -2.25
SNCAP37840 SNORA40.6-201ENST00000391153 128 ntBASIC0.97□□□□□ -2.25
SNCAP37840 U6atac.2-201ENST00000408644 118 ntBASIC0.97□□□□□ -2.25
SNCAP37840 TOMM22P2-201ENST00000430735 237 ntBASIC0.97□□□□□ -2.25
SNCAP37840 AC004865.1-201ENST00000442276 1003 ntBASIC0.97□□□□□ -2.25
SNCAP37840 AC010095.1-201ENST00000443543 144 ntBASIC0.97□□□□□ -2.25
SNCAP37840 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.97□□□□□ -2.25
SNCAP37840 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.97□□□□□ -2.25
SNCAP37840 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.97□□□□□ -2.25
SNCAP37840 AC104073.1-201ENST00000451988 151 ntBASIC0.97□□□□□ -2.25
SNCAP37840 RN7SKP210-201ENST00000459176 261 ntBASIC0.97□□□□□ -2.25
SNCAP37840 VPS26AP1-201ENST00000483197 979 ntBASIC0.97□□□□□ -2.25
SNCAP37840 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.97□□□□□ -2.25
SNCAP37840 AC025459.1-201ENST00000504072 156 ntBASIC0.97□□□□□ -2.25
SNCAP37840 AC098591.2-201ENST00000510152 315 ntBASIC0.97□□□□□ -2.25
SNCAP37840 AC117525.1-201ENST00000515228 503 ntBASIC0.97□□□□□ -2.25
SNCAP37840 RNU6-488P-201ENST00000515918 99 ntBASIC0.97□□□□□ -2.25
SNCAP37840 RNU6-362P-201ENST00000516736 90 ntBASIC0.97□□□□□ -2.25
SNCAP37840 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC0.97□□□□□ -2.25
SNCAP37840 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
SNCAP37840 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.97□□□□□ -2.25
SNCAP37840 EEF1B2P4-201ENST00000551398 348 ntBASIC0.97□□□□□ -2.25
SNCAP37840 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.97□□□□□ -2.25
SNCAP37840 AC233702.2-202ENST00000562547 291 ntBASIC0.97□□□□□ -2.25
SNCAP37840 AC105245.1-201ENST00000581934 244 ntBASIC0.97□□□□□ -2.25
SNCAP37840 AC105224.1-201ENST00000587055 421 ntBASIC0.97□□□□□ -2.25
SNCAP37840 AC010738.1-201ENST00000604970 987 ntBASIC0.97□□□□□ -2.25
SNCAP37840 AL138478.1-201ENST00000612252 832 ntBASIC0.97□□□□□ -2.25
SNCAP37840 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.97□□□□□ -2.25
SNCAP37840 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.97□□□□□ -2.25
SNCAP37840 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SNCAP37840 AP000560.1-201ENST00000624150 1937 ntBASIC0.97□□□□□ -2.25
SNCAP37840 RNU4-91P-201ENST00000364778 135 ntBASIC0.96□□□□□ -2.26
SNCAP37840 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.96□□□□□ -2.26
SNCAP37840 RNU6-882P-201ENST00000391025 103 ntBASIC0.96□□□□□ -2.26
SNCAP37840 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.96□□□□□ -2.26
SNCAP37840 EIF4EP2-201ENST00000422816 654 ntBASIC0.96□□□□□ -2.26
SNCAP37840 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.96□□□□□ -2.26
SNCAP37840 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.96□□□□□ -2.26
SNCAP37840 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.96□□□□□ -2.26
SNCAP37840 AC009474.2-201ENST00000451383 136 ntBASIC0.96□□□□□ -2.26
SNCAP37840 RPS20P24-201ENST00000457473 361 ntBASIC0.96□□□□□ -2.26
SNCAP37840 SNORD97-201ENST00000459187 142 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms