Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.03□□□□□ -1.6
GPC1P35052 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
GPC1P35052 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.03□□□□□ -1.6
GPC1P35052 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GPC1P35052 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
GPC1P35052 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GPC1P35052 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.03□□□□□ -1.6
GPC1P35052 Y_RNA.441-201ENST00000384123 112 ntBASIC5.03□□□□□ -1.6
GPC1P35052 Y_RNA.488-201ENST00000384403 102 ntBASIC5.03□□□□□ -1.6
GPC1P35052 SNORD20-201ENST00000384550 80 ntBASIC5.03□□□□□ -1.6
GPC1P35052 MIR105-1-201ENST00000385222 81 ntBASIC5.03□□□□□ -1.6
GPC1P35052 RNU6-837P-201ENST00000391056 108 ntBASIC5.03□□□□□ -1.6
GPC1P35052 LAP3P1-201ENST00000403648 294 ntBASIC5.03□□□□□ -1.6
GPC1P35052 RNU5E-9P-201ENST00000411164 104 ntBASIC5.03□□□□□ -1.6
GPC1P35052 Y_RNA.629-201ENST00000411368 105 ntBASIC5.03□□□□□ -1.6
GPC1P35052 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.03□□□□□ -1.6
GPC1P35052 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.03□□□□□ -1.6
GPC1P35052 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.03□□□□□ -1.6
GPC1P35052 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.03□□□□□ -1.6
GPC1P35052 AL162725.1-201ENST00000435405 301 ntBASIC5.03□□□□□ -1.6
GPC1P35052 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.03□□□□□ -1.6
GPC1P35052 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.03□□□□□ -1.6
GPC1P35052 AP000281.1-201ENST00000444036 316 ntBASIC5.03□□□□□ -1.6
GPC1P35052 AL590399.6-201ENST00000446396 307 ntBASIC5.03□□□□□ -1.6
GPC1P35052 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.03□□□□□ -1.6
GPC1P35052 RPL23AP24-201ENST00000458203 385 ntBASIC5.03□□□□□ -1.6
GPC1P35052 AC073901.1-201ENST00000462471 408 ntBASIC5.03□□□□□ -1.6
GPC1P35052 COX6B1P2-201ENST00000489624 230 ntBASIC5.03□□□□□ -1.6
GPC1P35052 ENPP7P11-201ENST00000505915 627 ntBASIC5.03□□□□□ -1.6
GPC1P35052 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
GPC1P35052 AC021006.3-201ENST00000530771 192 ntBASIC5.03□□□□□ -1.6
GPC1P35052 AC008749.1-201ENST00000597650 306 ntBASIC5.03□□□□□ -1.6
GPC1P35052 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.03□□□□□ -1.6
GPC1P35052 AC000068.2-201ENST00000608816 460 ntBASIC5.03□□□□□ -1.6
GPC1P35052 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GPC1P35052 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.03□□□□□ -1.6
GPC1P35052 SAGE2P-201ENST00000420011 2126 ntBASIC5.03□□□□□ -1.6
GPC1P35052 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.03□□□□□ -1.6
GPC1P35052 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
GPC1P35052 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GPC1P35052 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.03□□□□□ -1.6
GPC1P35052 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
GPC1P35052 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GPC1P35052 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GPC1P35052 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GPC1P35052 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.02□□□□□ -1.61
GPC1P35052 UBE2WP1-201ENST00000362030 340 ntBASIC5.02□□□□□ -1.61
GPC1P35052 MIR410-201ENST00000362222 80 ntBASIC5.02□□□□□ -1.61
GPC1P35052 RNA5SP361-201ENST00000362686 118 ntBASIC5.02□□□□□ -1.61
GPC1P35052 RN7SKP124-201ENST00000364730 341 ntBASIC5.02□□□□□ -1.61
GPC1P35052 RNU6-336P-201ENST00000364891 107 ntBASIC5.02□□□□□ -1.61
GPC1P35052 RNU5E-7P-201ENST00000365290 117 ntBASIC5.02□□□□□ -1.61
GPC1P35052 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.02□□□□□ -1.61
GPC1P35052 Y_RNA.435-201ENST00000384095 112 ntBASIC5.02□□□□□ -1.61
GPC1P35052 MIR32-201ENST00000384965 70 ntBASIC5.02□□□□□ -1.61
GPC1P35052 MIR186-201ENST00000384988 86 ntBASIC5.02□□□□□ -1.61
GPC1P35052 MIR34A-201ENST00000385130 110 ntBASIC5.02□□□□□ -1.61
GPC1P35052 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GPC1P35052 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GPC1P35052 SNORA48.4-201ENST00000391089 134 ntBASIC5.02□□□□□ -1.61
GPC1P35052 AC005522.1-201ENST00000395416 346 ntBASIC5.02□□□□□ -1.61
GPC1P35052 DUTP5-201ENST00000406790 469 ntBASIC5.02□□□□□ -1.61
GPC1P35052 RNA5SP487-201ENST00000410186 122 ntBASIC5.02□□□□□ -1.61
GPC1P35052 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.02□□□□□ -1.61
GPC1P35052 AC007560.1-201ENST00000426912 237 ntBASIC5.02□□□□□ -1.61
GPC1P35052 AC011742.1-201ENST00000431448 434 ntBASIC5.02□□□□□ -1.61
GPC1P35052 CKS1BP5-201ENST00000434172 273 ntBASIC5.02□□□□□ -1.61
GPC1P35052 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.02□□□□□ -1.61
GPC1P35052 GAPDHP25-201ENST00000447061 1001 ntBASIC5.02□□□□□ -1.61
GPC1P35052 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.02□□□□□ -1.61
GPC1P35052 AL353705.4-201ENST00000449661 238 ntBASIC5.02□□□□□ -1.61
GPC1P35052 EIF4A1P11-201ENST00000451239 222 ntBASIC5.02□□□□□ -1.61
GPC1P35052 SSXP4-201ENST00000451349 245 ntBASIC5.02□□□□□ -1.61
GPC1P35052 AC100832.1-201ENST00000471945 383 ntBASIC5.02□□□□□ -1.61
GPC1P35052 AC006427.1-201ENST00000514359 712 ntBASIC5.02□□□□□ -1.61
GPC1P35052 HMGB1P40-201ENST00000525121 540 ntBASIC5.02□□□□□ -1.61
GPC1P35052 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.02□□□□□ -1.61
GPC1P35052 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.02□□□□□ -1.61
GPC1P35052 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GPC1P35052 RPL7P50-201ENST00000600588 727 ntBASIC5.02□□□□□ -1.61
GPC1P35052 AC005828.6-201ENST00000606610 232 ntBASIC5.02□□□□□ -1.61
GPC1P35052 AL049539.1-201ENST00000611964 459 ntBASIC5.02□□□□□ -1.61
GPC1P35052 MIR8080-201ENST00000622224 89 ntBASIC5.02□□□□□ -1.61
GPC1P35052 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.02□□□□□ -1.61
GPC1P35052 AC099506.2-201ENST00000623074 221 ntBASIC5.02□□□□□ -1.61
GPC1P35052 AC074101.1-201ENST00000637861 241 ntBASIC5.02□□□□□ -1.61
GPC1P35052 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
GPC1P35052 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.02□□□□□ -1.61
GPC1P35052 AC009541.1-201ENST00000438279 2662 ntBASIC5.02□□□□□ -1.61
GPC1P35052 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GPC1P35052 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GPC1P35052 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.02□□□□□ -1.61
GPC1P35052 AC009812.4-201ENST00000569134 1805 ntBASIC5.02□□□□□ -1.61
GPC1P35052 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.02□□□□□ -1.61
GPC1P35052 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
GPC1P35052 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.01□□□□□ -1.61
GPC1P35052 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GPC1P35052 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
GPC1P35052 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.01□□□□□ -1.61
GPC1P35052 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms