Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MIR1-2-201ENST00000384961 85 ntBASIC3.68□□□□□ -1.82
CIITAP33076 RNA5SP31-201ENST00000411144 127 ntBASIC3.68□□□□□ -1.82
CIITAP33076 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.68□□□□□ -1.82
CIITAP33076 SETP5-201ENST00000437270 562 ntBASIC3.68□□□□□ -1.82
CIITAP33076 DPPA3P1-201ENST00000448050 469 ntBASIC3.68□□□□□ -1.82
CIITAP33076 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.68□□□□□ -1.82
CIITAP33076 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.68□□□□□ -1.82
CIITAP33076 AC135721.1-201ENST00000497954 479 ntBASIC3.68□□□□□ -1.82
CIITAP33076 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.68□□□□□ -1.82
CIITAP33076 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.68□□□□□ -1.82
CIITAP33076 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CIITAP33076 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.68□□□□□ -1.82
CIITAP33076 MTND1P35-201ENST00000526739 508 ntBASIC3.68□□□□□ -1.82
CIITAP33076 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
CIITAP33076 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.68□□□□□ -1.82
CIITAP33076 AC011602.1-201ENST00000546484 331 ntBASIC3.68□□□□□ -1.82
CIITAP33076 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.68□□□□□ -1.82
CIITAP33076 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.68□□□□□ -1.82
CIITAP33076 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.68□□□□□ -1.82
CIITAP33076 MIR5004-201ENST00000579078 107 ntBASIC3.68□□□□□ -1.82
CIITAP33076 MIR4293-201ENST00000584305 78 ntBASIC3.68□□□□□ -1.82
CIITAP33076 AL158211.4-201ENST00000606988 584 ntBASIC3.68□□□□□ -1.82
CIITAP33076 AC093788.1-201ENST00000609356 927 ntBASIC3.68□□□□□ -1.82
CIITAP33076 U6.42-201ENST00000618440 107 ntBASIC3.68□□□□□ -1.82
CIITAP33076 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
CIITAP33076 AL136313.1-201ENST00000624804 202 ntBASIC3.68□□□□□ -1.82
CIITAP33076 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.68□□□□□ -1.82
CIITAP33076 AC019226.1-201ENST00000625666 515 ntBASIC3.68□□□□□ -1.82
CIITAP33076 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.68□□□□□ -1.82
CIITAP33076 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.68□□□□□ -1.82
CIITAP33076 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CIITAP33076 AL021368.2-201ENST00000606125 5352 ntBASIC3.68□□□□□ -1.82
CIITAP33076 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CIITAP33076 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CIITAP33076 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CIITAP33076 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.67□□□□□ -1.82
CIITAP33076 Y_RNA.295-201ENST00000364918 102 ntBASIC3.67□□□□□ -1.82
CIITAP33076 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CIITAP33076 RNU6-1158P-201ENST00000391167 107 ntBASIC3.67□□□□□ -1.82
CIITAP33076 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CIITAP33076 USP9YP27-201ENST00000418455 438 ntBASIC3.67□□□□□ -1.82
CIITAP33076 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.67□□□□□ -1.82
CIITAP33076 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.67□□□□□ -1.82
CIITAP33076 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.67□□□□□ -1.82
CIITAP33076 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.67□□□□□ -1.82
CIITAP33076 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.67□□□□□ -1.82
CIITAP33076 RPL23AP83-201ENST00000434984 473 ntBASIC3.67□□□□□ -1.82
CIITAP33076 HMGB3P11-201ENST00000440127 604 ntBASIC3.67□□□□□ -1.82
CIITAP33076 AC093156.1-201ENST00000440382 670 ntBASIC3.67□□□□□ -1.82
CIITAP33076 TXNP1-201ENST00000441872 371 ntBASIC3.67□□□□□ -1.82
CIITAP33076 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.67□□□□□ -1.82
CIITAP33076 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.67□□□□□ -1.82
CIITAP33076 BX510359.1-201ENST00000456973 237 ntBASIC3.67□□□□□ -1.82
CIITAP33076 RNU7-59P-201ENST00000459101 61 ntBASIC3.67□□□□□ -1.82
CIITAP33076 RPL23AP14-201ENST00000468281 468 ntBASIC3.67□□□□□ -1.82
CIITAP33076 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.67□□□□□ -1.82
CIITAP33076 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.67□□□□□ -1.82
CIITAP33076 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.67□□□□□ -1.82
CIITAP33076 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.67□□□□□ -1.82
CIITAP33076 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.67□□□□□ -1.82
CIITAP33076 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.67□□□□□ -1.82
CIITAP33076 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.67□□□□□ -1.82
CIITAP33076 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.67□□□□□ -1.82
CIITAP33076 AL359212.1-201ENST00000556608 614 ntBASIC3.67□□□□□ -1.82
CIITAP33076 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.67□□□□□ -1.82
CIITAP33076 GLUD1P4-201ENST00000590914 418 ntBASIC3.67□□□□□ -1.82
CIITAP33076 BNIP3P30-201ENST00000601184 574 ntBASIC3.67□□□□□ -1.82
CIITAP33076 AC007621.1-201ENST00000604544 437 ntBASIC3.67□□□□□ -1.82
CIITAP33076 AL035413.2-201ENST00000604801 525 ntBASIC3.67□□□□□ -1.82
CIITAP33076 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.67□□□□□ -1.82
CIITAP33076 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.67□□□□□ -1.82
CIITAP33076 AL442067.2-201ENST00000614033 363 ntBASIC3.67□□□□□ -1.82
CIITAP33076 AC073476.4-201ENST00000628409 72 ntBASIC3.67□□□□□ -1.82
CIITAP33076 MIR3651-201ENST00000630427 90 ntBASIC3.67□□□□□ -1.82
CIITAP33076 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CIITAP33076 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CIITAP33076 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CIITAP33076 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.67□□□□□ -1.82
CIITAP33076 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CIITAP33076 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
CIITAP33076 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CIITAP33076 PWAR6-201ENST00000552334 4618 ntBASIC3.66□□□□□ -1.82
CIITAP33076 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CIITAP33076 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.66□□□□□ -1.82
CIITAP33076 RNU6-1120P-201ENST00000362988 108 ntBASIC3.66□□□□□ -1.82
CIITAP33076 RNU6-1097P-201ENST00000363586 107 ntBASIC3.66□□□□□ -1.82
CIITAP33076 RNU5E-4P-201ENST00000364931 120 ntBASIC3.66□□□□□ -1.82
CIITAP33076 RNU6-754P-201ENST00000391166 107 ntBASIC3.66□□□□□ -1.82
CIITAP33076 RN7SKP285-201ENST00000410137 318 ntBASIC3.66□□□□□ -1.82
CIITAP33076 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.66□□□□□ -1.82
CIITAP33076 RPL27AP8-201ENST00000424277 446 ntBASIC3.66□□□□□ -1.82
CIITAP33076 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.66□□□□□ -1.82
CIITAP33076 GPR143P-201ENST00000434155 205 ntBASIC3.66□□□□□ -1.82
CIITAP33076 RPL7P54-201ENST00000438336 674 ntBASIC3.66□□□□□ -1.82
CIITAP33076 MTCO3P18-201ENST00000440206 761 ntBASIC3.66□□□□□ -1.82
CIITAP33076 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
CIITAP33076 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.66□□□□□ -1.82
CIITAP33076 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.66□□□□□ -1.82
CIITAP33076 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.66□□□□□ -1.82
CIITAP33076 RN7SL330P-201ENST00000469709 307 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms