Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RN7SL863P-201ENST00000462370 296 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.32□□□□□ -1.88
HOXC13P31276 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC13P31276 CDC42P4-201ENST00000510507 563 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 AC079140.3-201ENST00000511111 550 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXC13P31276 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXC13P31276 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXC13P31276 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC13P31276 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXC13P31276 RPS3AP4-201ENST00000555161 764 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 ZNF519P3-201ENST00000557158 1032 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 UBL5P2-201ENST00000583788 219 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXC13P31276 AC087683.1-201ENST00000591187 441 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 AC008739.2-201ENST00000597006 317 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 AC025449.1-201ENST00000603896 529 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 AC006023.1-201ENST00000603944 259 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXC13P31276 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC13P31276 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 AL603758.1-201ENST00000618654 241 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC13P31276 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXC13P31276 AC099063.3-201ENST00000642066 185 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.32□□□□□ -1.88
HOXC13P31276 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HOXC13P31276 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC13P31276 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC13P31276 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HOXC13P31276 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC13P31276 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXC13P31276 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC13P31276 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXC13P31276 RNU6-223P-201ENST00000362830 107 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 Y_RNA.303-201ENST00000364998 94 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 RNU6-432P-201ENST00000384196 109 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 RNU6-301P-201ENST00000384277 107 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 SNORA36C-201ENST00000384289 132 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 MIR548F1-201ENST00000408667 84 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 RN7SKP142-201ENST00000411236 328 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 RPS7P13-201ENST00000413955 498 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 Z85995.1-201ENST00000415547 335 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AC098592.1-201ENST00000419352 333 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 YWHAZP7-201ENST00000436906 631 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC13P31276 MTCO3P38-201ENST00000468910 766 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC13P31276 RNU1-143P-201ENST00000516296 146 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 RNU6-840P-201ENST00000517275 65 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AP002963.1-201ENST00000530590 184 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC13P31276 AC068587.4-201ENST00000533893 186 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AP000873.5-201ENST00000533906 236 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC13P31276 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC13P31276 AC128657.1-201ENST00000549459 145 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AC012435.1-202ENST00000568772 240 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AC002400.1-201ENST00000569310 726 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC13P31276 AC060771.1-201ENST00000582031 164 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC13P31276 AC005498.1-201ENST00000592125 465 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 BNIP3P23-201ENST00000599655 511 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC13P31276 U1.23-201ENST00000610293 146 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AC013476.2-201ENST00000614456 459 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 RNU1-68P-201ENST00000615382 146 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AC007742.2-201ENST00000618226 398 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC13P31276 AC104985.2-201ENST00000620598 500 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 U1.39-201ENST00000621562 146 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 SEPT14P19-203ENST00000633205 211 ntBASIC3.31□□□□□ -1.88
HOXC13P31276 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HOXC13P31276 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC13P31276 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC13P31276 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
HOXC13P31276 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC13P31276 MTND5P27-201ENST00000428871 1720 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC13P31276 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HOXC13P31276 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC13P31276 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC13P31276 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC13P31276 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC13P31276 U3.4-201ENST00000363352 213 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 SNORA23-201ENST00000365128 182 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC13P31276 Y_RNA.390-201ENST00000383932 102 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 RNU6-1200P-201ENST00000384162 107 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 AL031577.2-201ENST00000404133 280 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC13P31276 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC13P31276 AC104651.1-201ENST00000427559 735 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC13P31276 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC13P31276 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC13P31276 SNRPEP8-201ENST00000442866 260 ntBASIC3.3□□□□□ -1.88
HOXC13P31276 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC13P31276 AC087588.1-201ENST00000462203 316 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms