Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 DUXAP11-201ENST00000603858 526 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 AC068313.1-201ENST00000604028 1008 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 TUSC7.1-201ENST00000610969 165 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
HOXA9P31269 MIR6873-201ENST00000622788 63 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 AP002791.1-201ENST00000623291 381 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXA9P31269 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXA9P31269 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXA9P31269 PABPC1P9-201ENST00000426076 1612 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
HOXA9P31269 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXA9P31269 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXA9P31269 Y_RNA.234-201ENST00000364409 97 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 RNU6-1200P-201ENST00000384162 107 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 RNU6-253P-201ENST00000384730 105 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXA9P31269 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 BX119904.4-201ENST00000424402 301 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 AC098826.1-201ENST00000433943 471 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 RPS15AP7-201ENST00000439294 405 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 AL606662.1-201ENST00000445763 553 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 ANKRD26P4-201ENST00000455755 950 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXA9P31269 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXA9P31269 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HOXA9P31269 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXA9P31269 RNU6-714P-201ENST00000516963 103 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.42□□□□□ -2.02
HOXA9P31269 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXA9P31269 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HOXA9P31269 OR4R1P-201ENST00000529879 463 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXA9P31269 HMGB1P14-201ENST00000557424 591 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 AC010546.1-201ENST00000569391 485 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 MIR4769-201ENST00000584126 77 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 OR1M4P-201ENST00000589199 287 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
HOXA9P31269 BBIP1P1-201ENST00000602999 279 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 AC004987.4-201ENST00000603383 338 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 AL031281.1-201ENST00000604049 488 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 AL022099.1-201ENST00000604551 712 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 AC012443.1-201ENST00000605605 231 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXA9P31269 AC010680.1-201ENST00000590024 3590 ntBASIC2.42□□□□□ -2.02
HOXA9P31269 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXA9P31269 MAPK10-266ENST00000641066 6555 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AL391994.1-201ENST00000254724 282 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 FRG1BP-201ENST00000278882 761 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXA9P31269 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HOXA9P31269 RNA5SP181-201ENST00000410246 98 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AC003685.2-201ENST00000422795 395 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AL445687.1-201ENST00000439946 251 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXA9P31269 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.41□□□□□ -2.02
HOXA9P31269 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.41□□□□□ -2.02
HOXA9P31269 MTND2P14-201ENST00000482139 351 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 LINC00888-204ENST00000487386 421 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXA9P31269 LTV1P1-201ENST00000510683 1237 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
HOXA9P31269 MTCYBP43-201ENST00000513621 740 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 Y_RNA.717-201ENST00000517106 92 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.41□□□□□ -2.02
HOXA9P31269 COX6CP5-201ENST00000527162 228 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 RANP3-201ENST00000530970 276 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXA9P31269 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.41□□□□□ -2.02
HOXA9P31269 AL158211.1-201ENST00000566763 763 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXA9P31269 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXA9P31269 DEFB122-202ENST00000569013 197 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AC090615.1-201ENST00000577519 154 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AL353997.4-201ENST00000586196 166 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXA9P31269 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXA9P31269 AL031176.1-201ENST00000604554 466 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AC063944.3-201ENST00000609969 533 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXA9P31269 AC009159.2-201ENST00000617603 606 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 AL607023.1-201ENST00000620045 248 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.41□□□□□ -2.02
HOXA9P31269 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXA9P31269 AC104454.1-201ENST00000421341 1401 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HOXA9P31269 Z82209.1-201ENST00000422141 2135 ntBASIC2.41□□□□□ -2.02
HOXA9P31269 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
HOXA9P31269 RNU6-462P-201ENST00000362659 105 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 MIR767-201ENST00000390228 109 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 RNU6-882P-201ENST00000391025 103 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AL591416.1-201ENST00000404015 867 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
HOXA9P31269 BEND7P1-201ENST00000422058 457 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AC010099.3-201ENST00000423896 409 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXA9P31269 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AC018634.1-201ENST00000437554 401 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms