Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RPL23AP11-201ENST00000475260 469 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC103975.1-201ENST00000482506 483 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 HIGD1AP13-201ENST00000509878 289 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.8□□□□□ -1.96
HLA-DPA1P20036 SNORA31.3-201ENST00000516029 96 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC023050.2-201ENST00000544968 387 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC090888.2-201ENST00000559765 1144 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DPA1P20036 MIR4999-201ENST00000585029 91 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC011458.1-201ENST00000604034 617 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AL355598.1-201ENST00000604169 202 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC013244.3-201ENST00000605614 388 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 TUSC7.1-201ENST00000610969 165 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC007998.5-201ENST00000622938 237 ntBASIC2.8□□□□□ -1.96
HLA-DPA1P20036 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DPA1P20036 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 RNU6-1083P-201ENST00000384022 107 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 RNU6-701P-201ENST00000384059 107 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 MIR181B1-201ENST00000385240 110 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HLA-DPA1P20036 TAS2R15P-201ENST00000390674 928 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 RSL24D1P4-201ENST00000400938 484 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DPA1P20036 RNU6-1328P-201ENST00000410938 106 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AL353729.1-201ENST00000425044 720 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AL135938.1-201ENST00000443141 297 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 TRBV1-201ENST00000476502 284 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AC096576.1-201ENST00000489014 359 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AC090096.1-201ENST00000489168 390 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AC020699.1-201ENST00000505161 445 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DPA1P20036 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AL356432.3-201ENST00000568952 465 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AL354943.1-201ENST00000572103 781 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DPA1P20036 KC877982.1-201ENST00000602313 470 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AC008277.2-201ENST00000605196 797 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AC107952.2-201ENST00000606048 486 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AC107214.2-201ENST00000608204 634 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 AL031667.3-201ENST00000620124 655 ntBASIC2.79□□□□□ -1.96
HLA-DPA1P20036 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DPA1P20036 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
HLA-DPA1P20036 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 ADAM3A-203ENST00000461344 2157 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AL137003.2-201ENST00000606924 2538 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 SNORA18.3-201ENST00000384122 132 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 MIR634-201ENST00000385208 97 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AL354941.1-201ENST00000438600 464 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 RPS24P13-201ENST00000442520 397 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 MTCO1P42-201ENST00000457379 726 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AC008716.1-201ENST00000511084 513 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 MTND2P32-201ENST00000521584 1038 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AP006587.4-201ENST00000526053 529 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AC021739.1-201ENST00000559631 174 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AC092953.2-201ENST00000608000 699 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AL589743.7-201ENST00000612637 233 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 AC025594.3-201ENST00000613068 790 ntBASIC2.78□□□□□ -1.96
HLA-DPA1P20036 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPA1P20036 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
HLA-DPA1P20036 AC080128.1-201ENST00000474389 1917 ntBASIC2.78□□□□□ -1.97
HLA-DPA1P20036 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AC010329.5-201ENST00000623497 2174 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 Y_RNA.46-201ENST00000362695 102 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 SNORA80A-201ENST00000363922 136 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 RNU6-658P-201ENST00000384606 106 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 RNU6-1072P-201ENST00000384703 107 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 RNU6-443P-201ENST00000384780 107 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 ELOCP17-201ENST00000414751 326 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AC093151.1-201ENST00000427711 313 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AC087499.2-201ENST00000432861 149 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 RPL36AP6-201ENST00000435770 321 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AP001486.1-201ENST00000463339 476 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AL121769.1-201ENST00000469473 401 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms