Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.04□□□□□ -1.6
ERCC3P19447 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.04□□□□□ -1.6
ERCC3P19447 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.04□□□□□ -1.6
ERCC3P19447 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.04□□□□□ -1.6
ERCC3P19447 AC025445.1-201ENST00000502728 300 ntBASIC5.04□□□□□ -1.6
ERCC3P19447 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.04□□□□□ -1.6
ERCC3P19447 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.04□□□□□ -1.6
ERCC3P19447 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.04□□□□□ -1.6
ERCC3P19447 TRAV37-201ENST00000553906 342 ntBASIC5.04□□□□□ -1.6
ERCC3P19447 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.04□□□□□ -1.6
ERCC3P19447 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.04□□□□□ -1.6
ERCC3P19447 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.04□□□□□ -1.6
ERCC3P19447 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ERCC3P19447 ZNF519P1-201ENST00000449011 1626 ntBASIC5.04□□□□□ -1.6
ERCC3P19447 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ERCC3P19447 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ERCC3P19447 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.03□□□□□ -1.6
ERCC3P19447 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ERCC3P19447 MIR372-201ENST00000362225 67 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 SNORD3E-201ENST00000362899 217 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 RNA5SP513-201ENST00000364648 118 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 RNU6-128P-201ENST00000383976 107 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ERCC3P19447 AL445189.1-201ENST00000405722 338 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 U3.42-201ENST00000408746 214 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 RNA5SP104-201ENST00000410989 118 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 RAC1P3-201ENST00000416129 580 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.03□□□□□ -1.6
ERCC3P19447 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.03□□□□□ -1.6
ERCC3P19447 AL356535.1-201ENST00000440335 398 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 AC130509.1-201ENST00000464158 433 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.03□□□□□ -1.6
ERCC3P19447 MTND5P5-201ENST00000503764 376 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 MIR892C-201ENST00000516410 77 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 IGKV2D-19-201ENST00000523346 262 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.03□□□□□ -1.6
ERCC3P19447 TVP23BP1-201ENST00000557500 617 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 OR1M4P-201ENST00000589199 287 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 MIR6128-201ENST00000615528 109 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 AC008013.2-202ENST00000637965 364 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.03□□□□□ -1.6
ERCC3P19447 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.03□□□□□ -1.6
ERCC3P19447 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
ERCC3P19447 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.03□□□□□ -1.6
ERCC3P19447 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ERCC3P19447 DHX9P1-201ENST00000436565 3076 ntBASIC5.03□□□□□ -1.6
ERCC3P19447 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC3P19447 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
ERCC3P19447 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ERCC3P19447 Y_RNA.324-201ENST00000365165 102 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 RNU6-140P-201ENST00000384566 108 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 MIR23B-201ENST00000384832 97 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 MTCYBP4-201ENST00000401524 249 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.02□□□□□ -1.61
ERCC3P19447 PGBD4P6-201ENST00000421501 610 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 AL590632.1-201ENST00000424289 371 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 MTCO2P12-201ENST00000427426 682 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
ERCC3P19447 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC3P19447 HMGB1P12-201ENST00000438594 598 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 AL359672.1-201ENST00000442302 409 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC3P19447 AL583843.1-201ENST00000456070 346 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.02□□□□□ -1.61
ERCC3P19447 RNU7-138P-201ENST00000459479 64 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 SNORD19B-201ENST00000459623 84 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC3P19447 RPL21P129-201ENST00000491732 478 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 RNA5SP49-201ENST00000516450 115 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.02□□□□□ -1.61
ERCC3P19447 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.02□□□□□ -1.61
ERCC3P19447 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.02□□□□□ -1.61
ERCC3P19447 RN7SL600P-201ENST00000581811 299 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 AL161729.3-201ENST00000603533 673 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 AC140113.4-201ENST00000622087 222 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 U6.99-201ENST00000637524 83 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 FAM35BP-202ENST00000497389 3337 ntBASIC5.02□□□□□ -1.61
ERCC3P19447 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
ERCC3P19447 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.02□□□□□ -1.61
ERCC3P19447 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ERCC3P19447 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ERCC3P19447 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.01□□□□□ -1.61
ERCC3P19447 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC5.01□□□□□ -1.61
ERCC3P19447 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.01□□□□□ -1.61
ERCC3P19447 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.01□□□□□ -1.61
ERCC3P19447 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ERCC3P19447 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ERCC3P19447 Y_RNA.339-201ENST00000365325 102 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 RNA5SP283-201ENST00000365604 119 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 RNA5SP151-201ENST00000365632 117 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ERCC3P19447 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.01□□□□□ -1.61
ERCC3P19447 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
ERCC3P19447 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.01□□□□□ -1.61
ERCC3P19447 XGY1-201ENST00000381172 446 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 RNU6-601P-201ENST00000384540 107 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.01□□□□□ -1.61
ERCC3P19447 RNU6-628P-201ENST00000410675 107 ntBASIC5.01□□□□□ -1.61
ERCC3P19447 RNU2-37P-201ENST00000410695 177 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms