| MUC1 | P15941 | NARSP2-202 | ENST00000522022 | 349 nt | TSL 3 BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | C11orf1-204 | ENST00000530214 | 599 nt | TSL 5 BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC103798.1-201 | ENST00000532562 | 376 nt | TSL 2 BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AP000889.2-201 | ENST00000532684 | 490 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | CCDC7-209 | ENST00000539197 | 581 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL133166.1-201 | ENST00000551040 | 1034 nt | TSL 4 BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC145350.1-201 | ENST00000567426 | 208 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC012435.1-202 | ENST00000568772 | 240 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC090616.2-202 | ENST00000584248 | 222 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC097467.3-208 | ENST00000593486 | 670 nt | TSL 5 BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | LINC01515-204 | ENST00000595269 | 402 nt | TSL 5 BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC004067.1-201 | ENST00000608733 | 700 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC012150.2-201 | ENST00000621300 | 544 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL356266.1-201 | ENST00000623311 | 483 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | SLC38A9-201 | ENST00000318672 | 2369 nt | APPRIS P1 TSL 2 BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | CFH-202 | ENST00000367429 | 4127 nt | APPRIS P1 TSL 1 (best) BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | XPO4-202 | ENST00000400602 | 9884 nt | APPRIS ALT1 TSL 5 BASIC | 2.1 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RNF128-202 | ENST00000324342 | 2654 nt | TSL 1 (best) BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | CCT4P2-201 | ENST00000233836 | 1548 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | MIR493-201 | ENST00000385254 | 89 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | U3.20-201 | ENST00000390909 | 217 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RPA3-203 | ENST00000401447 | 414 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RNA5SP38-201 | ENST00000410750 | 119 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RNU4-72P-201 | ENST00000410754 | 173 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RPL23AP39-201 | ENST00000415533 | 405 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL390962.1-201 | ENST00000421507 | 526 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | HMGN2P38-201 | ENST00000423806 | 265 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RPL23AP45-201 | ENST00000476406 | 468 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC090096.1-201 | ENST00000489168 | 390 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC034222.1-201 | ENST00000494052 | 532 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC008883.2-201 | ENST00000505796 | 414 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | HMGB3P3-201 | ENST00000510526 | 400 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC109927.1-202 | ENST00000511951 | 282 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RNA5SP471-201 | ENST00000516971 | 106 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC068587.4-201 | ENST00000533893 | 186 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC087241.2-201 | ENST00000535801 | 324 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | CCDC7-208 | ENST00000537047 | 657 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC092747.1-201 | ENST00000538920 | 351 nt | TSL 5 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AP003781.1-201 | ENST00000543403 | 404 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC010183.2-202 | ENST00000546791 | 382 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | MEG8-218 | ENST00000556720 | 456 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC135628.1-201 | ENST00000568867 | 534 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | RPL23AP84-201 | ENST00000571193 | 464 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AP001004.1-201 | ENST00000582468 | 324 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | MIR4307-201 | ENST00000582802 | 84 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC105224.1-201 | ENST00000587055 | 421 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | NIFKP6-201 | ENST00000598115 | 845 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC006023.1-201 | ENST00000603944 | 259 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL109811.3-202 | ENST00000612387 | 651 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC004223.4-201 | ENST00000612426 | 332 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AL603758.1-201 | ENST00000618654 | 241 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | MIR6130-201 | ENST00000619419 | 109 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC023490.3-201 | ENST00000621762 | 358 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC079248.2-201 | ENST00000623779 | 326 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC097520.1-201 | ENST00000624435 | 385 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC079416.3-201 | ENST00000624479 | 549 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC019226.2-201 | ENST00000625973 | 424 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AC215522.3-201 | ENST00000635602 | 354 nt | TSL 5 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | AP000550.4-201 | ENST00000639507 | 358 nt | TSL 3 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | LIFR-201 | ENST00000263409 | 10089 nt | APPRIS P1 TSL 1 (best) BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | ZNF883-201 | ENST00000619044 | 2051 nt | APPRIS P1 TSL 5 BASIC | 2.09 | □□□□□ -2.07 | | |
| MUC1 | P15941 | EYS-202 | ENST00000342421 | 2168 nt | TSL 1 (best) BASIC | 2.09 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AC092125.1-201 | ENST00000562568 | 1995 nt | BASIC | 2.09 | □□□□□ -2.08 | | |
| MUC1 | P15941 | CDC27-207 | ENST00000531206 | 3177 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | C1orf141-202 | ENST00000371006 | 2053 nt | APPRIS P3 TSL 2 BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AC009902.3-201 | ENST00000606235 | 2172 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | LINC02510-201 | ENST00000509798 | 1576 nt | TSL 1 (best) BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | KCNE2-201 | ENST00000290310 | 1051 nt | APPRIS P1 TSL 1 (best) BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | Y_RNA.169-201 | ENST00000363745 | 96 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | RNU6-637P-201 | ENST00000384050 | 107 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | SNORA41-201 | ENST00000384675 | 132 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | Y_RNA.560-201 | ENST00000384689 | 102 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | CCNG1P1-201 | ENST00000406783 | 885 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AL359704.1-201 | ENST00000411586 | 781 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AC107081.1-201 | ENST00000414975 | 361 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AL160272.1-201 | ENST00000421509 | 521 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AC093151.3-203 | ENST00000422305 | 514 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AC093019.2-201 | ENST00000432294 | 384 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AC097662.1-205 | ENST00000433324 | 241 nt | TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | UBE2V1P13-201 | ENST00000436983 | 439 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | MTCYBP39-201 | ENST00000437562 | 491 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AL445567.1-201 | ENST00000439121 | 144 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | ACBD3-AS1-201 | ENST00000440540 | 535 nt | TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | RPL7P36-201 | ENST00000444633 | 681 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | GDI2P2-201 | ENST00000445131 | 608 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | TPT1P14-201 | ENST00000448018 | 505 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AL158210.1-201 | ENST00000448835 | 500 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | RPS3P1-201 | ENST00000456781 | 192 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | MTCO1P42-201 | ENST00000457379 | 726 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | MTCO2P6-201 | ENST00000463134 | 685 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | BZW1P2-201 | ENST00000473537 | 826 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | RPL31P60-201 | ENST00000478450 | 367 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AC090255.1-201 | ENST00000495779 | 349 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AC098868.1-201 | ENST00000512628 | 624 nt | TSL 2 BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | RNU4-29P-201 | ENST00000515943 | 174 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | RNA5SP320-201 | ENST00000516263 | 124 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | RNA5SP148-201 | ENST00000516527 | 94 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | RNU6-232P-201 | ENST00000517144 | 64 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | AC104233.2-201 | ENST00000518922 | 414 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| MUC1 | P15941 | CKS1BP7-201 | ENST00000522230 | 235 nt | BASIC | 2.08 | □□□□□ -2.08 | | |