Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 API5P2-201ENST00000397055 1498 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 AC032011.1-201ENST00000611703 1549 ntBASIC3.08□□□□□ -1.92
HLA-DOBP13765 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DOBP13765 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DOBP13765 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DOBP13765 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DOBP13765 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DOBP13765 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DOBP13765 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DOBP13765 RPL7P26-201ENST00000333817 754 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 MIR30E-201ENST00000362104 92 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 RNU4-35P-201ENST00000362588 141 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 Y_RNA.303-201ENST00000364998 94 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 SNORD115-7-201ENST00000365306 82 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 RNU6-1029P-201ENST00000384109 107 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 MT-TL1-201ENST00000386347 75 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 SNORD17-201ENST00000390930 237 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 RNU6-876P-201ENST00000391295 104 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 MIR1290-201ENST00000408735 78 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 RNU6-373P-201ENST00000411247 98 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 MTCYBP8-201ENST00000422855 651 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC018630.2-202ENST00000422992 927 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 CALM2P2-201ENST00000428512 440 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC091286.1-201ENST00000431233 461 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 NEFMP1-201ENST00000443423 1006 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DOBP13765 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 RPS20P20-201ENST00000460498 340 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 SNORA70.14-201ENST00000516205 110 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 SNORA31.8-201ENST00000516327 108 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 RN7SKP219-201ENST00000516825 296 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 SNORA20.3-201ENST00000516880 132 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 MIR2276-201ENST00000516886 89 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC026403.1-201ENST00000518938 295 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 OR5B19P-201ENST00000531766 928 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 OR5B10P-201ENST00000532869 642 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DOBP13765 AP004242.1-201ENST00000533701 349 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC015917.1-201ENST00000579654 510 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 MIR4425-201ENST00000580572 84 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 AP001029.3-201ENST00000588063 596 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC104763.2-201ENST00000604179 382 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 RMST_3.1-201ENST00000611651 109 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AL365204.3-201ENST00000612448 685 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC011155.2-201ENST00000623202 216 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC009033.1-201ENST00000624279 431 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC024614.3-201ENST00000637860 256 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DOBP13765 AC103710.2-202ENST00000641454 2853 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DOBP13765 RIOK3P1-201ENST00000418778 1528 ntBASIC3.07□□□□□ -1.92
HLA-DOBP13765 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DOBP13765 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DOBP13765 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DOBP13765 TNPO1P3-201ENST00000436471 2662 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DOBP13765 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DOBP13765 RNU6-552P-201ENST00000362869 119 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 RNA5SP197-201ENST00000363357 119 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HLA-DOBP13765 RNU6-817P-201ENST00000391083 104 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DOBP13765 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DOBP13765 RNU6-1068P-201ENST00000410958 103 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 RN7SKP140-201ENST00000411196 284 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 Z99755.1-201ENST00000414048 380 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 AC009237.5-201ENST00000414271 501 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 AL451054.2-201ENST00000420896 202 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DOBP13765 AC092017.2-201ENST00000427600 362 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 AP000907.1-201ENST00000428428 510 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DOBP13765 NEK4P1-201ENST00000433383 879 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 RPL21P23-201ENST00000446654 460 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DOBP13765 AC004801.2-202ENST00000463559 283 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DOBP13765 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DOBP13765 MTCYBP18-201ENST00000501056 747 ntBASIC3.06□□□□□ -1.92
HLA-DOBP13765 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms