Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ZNF192P1-203ENST00000565888 810 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AC098848.2-201ENST00000588023 330 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.51□□□□□ -1.85
MMP3P08254 AC008536.2-201ENST00000607284 349 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AC093838.1-201ENST00000613014 469 ntBASIC3.51□□□□□ -1.85
MMP3P08254 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.51□□□□□ -1.85
MMP3P08254 AL137790.1-201ENST00000634283 177 ntBASIC3.51□□□□□ -1.85
MMP3P08254 U6.98-201ENST00000637157 84 ntBASIC3.51□□□□□ -1.85
MMP3P08254 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
MMP3P08254 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MMP3P08254 AC093536.2-201ENST00000565257 1406 ntBASIC3.51□□□□□ -1.85
MMP3P08254 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
MMP3P08254 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.51□□□□□ -1.85
MMP3P08254 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
MMP3P08254 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
MMP3P08254 RIOK3P1-201ENST00000418778 1528 ntBASIC3.5□□□□□ -1.85
MMP3P08254 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.5□□□□□ -1.85
MMP3P08254 RNU6-1085P-201ENST00000363576 107 ntBASIC3.5□□□□□ -1.85
MMP3P08254 RNU6-188P-201ENST00000364207 107 ntBASIC3.5□□□□□ -1.85
MMP3P08254 SNORA23-201ENST00000365128 182 ntBASIC3.5□□□□□ -1.85
MMP3P08254 RNU6-483P-201ENST00000384088 108 ntBASIC3.5□□□□□ -1.85
MMP3P08254 RNU6-754P-201ENST00000391166 107 ntBASIC3.5□□□□□ -1.85
MMP3P08254 SDCBPP3-201ENST00000419629 891 ntBASIC3.5□□□□□ -1.85
MMP3P08254 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.5□□□□□ -1.85
MMP3P08254 AC137499.1-201ENST00000427602 88 ntBASIC3.5□□□□□ -1.85
MMP3P08254 MTND1P2-201ENST00000430604 821 ntBASIC3.5□□□□□ -1.85
MMP3P08254 AC024082.2-201ENST00000434771 238 ntBASIC3.5□□□□□ -1.85
MMP3P08254 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.5□□□□□ -1.85
MMP3P08254 RPL7P54-201ENST00000438336 674 ntBASIC3.5□□□□□ -1.85
MMP3P08254 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.5□□□□□ -1.85
MMP3P08254 MTATP6P30-201ENST00000443540 664 ntBASIC3.5□□□□□ -1.85
MMP3P08254 AC016696.1-201ENST00000446949 318 ntBASIC3.5□□□□□ -1.85
MMP3P08254 NFU1P2-201ENST00000448700 469 ntBASIC3.5□□□□□ -1.85
MMP3P08254 MTND2P24-201ENST00000453434 806 ntBASIC3.5□□□□□ -1.85
MMP3P08254 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.5□□□□□ -1.85
MMP3P08254 RNU6-420P-201ENST00000458780 107 ntBASIC3.5□□□□□ -1.85
MMP3P08254 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MMP3P08254 PCBP2P3-201ENST00000509726 843 ntBASIC3.5□□□□□ -1.85
MMP3P08254 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MMP3P08254 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.5□□□□□ -1.85
MMP3P08254 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.5□□□□□ -1.85
MMP3P08254 AC018630.1-201ENST00000541376 925 ntBASIC3.5□□□□□ -1.85
MMP3P08254 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.5□□□□□ -1.85
MMP3P08254 AC128657.1-201ENST00000549459 145 ntBASIC3.5□□□□□ -1.85
MMP3P08254 TGIF1P1-201ENST00000558095 802 ntBASIC3.5□□□□□ -1.85
MMP3P08254 H3F3AP1-201ENST00000559984 334 ntBASIC3.5□□□□□ -1.85
MMP3P08254 FAM60BP-201ENST00000578364 658 ntBASIC3.5□□□□□ -1.85
MMP3P08254 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.5□□□□□ -1.85
MMP3P08254 AF038458.1-201ENST00000588406 262 ntBASIC3.5□□□□□ -1.85
MMP3P08254 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.5□□□□□ -1.85
MMP3P08254 AP000907.4-201ENST00000604143 237 ntBASIC3.5□□□□□ -1.85
MMP3P08254 MIR6130-201ENST00000619419 109 ntBASIC3.5□□□□□ -1.85
MMP3P08254 AC009161.2-201ENST00000624626 138 ntBASIC3.5□□□□□ -1.85
MMP3P08254 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.5□□□□□ -1.85
MMP3P08254 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
MMP3P08254 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
MMP3P08254 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.5□□□□□ -1.85
MMP3P08254 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
MMP3P08254 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.49□□□□□ -1.85
MMP3P08254 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
MMP3P08254 DDX10P1-201ENST00000448545 1933 ntBASIC3.49□□□□□ -1.85
MMP3P08254 SNORA5B-201ENST00000363786 132 ntBASIC3.49□□□□□ -1.85
MMP3P08254 SNORA71.1-201ENST00000364523 117 ntBASIC3.49□□□□□ -1.85
MMP3P08254 Y_RNA.367-201ENST00000365544 101 ntBASIC3.49□□□□□ -1.85
MMP3P08254 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.49□□□□□ -1.85
MMP3P08254 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.49□□□□□ -1.85
MMP3P08254 Y_RNA.453-201ENST00000384223 109 ntBASIC3.49□□□□□ -1.85
MMP3P08254 UBE2V1P2-201ENST00000397758 440 ntBASIC3.49□□□□□ -1.85
MMP3P08254 AL136372.1-201ENST00000403060 228 ntBASIC3.49□□□□□ -1.85
MMP3P08254 AL591416.1-201ENST00000404015 867 ntBASIC3.49□□□□□ -1.85
MMP3P08254 CIR1P3-201ENST00000405137 479 ntBASIC3.49□□□□□ -1.85
MMP3P08254 RN7SKP220-201ENST00000410611 288 ntBASIC3.49□□□□□ -1.85
MMP3P08254 AC018630.2-202ENST00000422992 927 ntBASIC3.49□□□□□ -1.85
MMP3P08254 PPP1R11P2-201ENST00000423543 382 ntBASIC3.49□□□□□ -1.85
MMP3P08254 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.49□□□□□ -1.85
MMP3P08254 ARF4P2-201ENST00000430209 526 ntBASIC3.49□□□□□ -1.85
MMP3P08254 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.49□□□□□ -1.85
MMP3P08254 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.49□□□□□ -1.85
MMP3P08254 GAPDHP27-201ENST00000447427 1020 ntBASIC3.49□□□□□ -1.85
MMP3P08254 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.49□□□□□ -1.85
MMP3P08254 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.49□□□□□ -1.85
MMP3P08254 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.49□□□□□ -1.85
MMP3P08254 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.49□□□□□ -1.85
MMP3P08254 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.49□□□□□ -1.85
MMP3P08254 AC010631.1-201ENST00000474150 156 ntBASIC3.49□□□□□ -1.85
MMP3P08254 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.49□□□□□ -1.85
MMP3P08254 RPL23AP55-201ENST00000498163 452 ntBASIC3.49□□□□□ -1.85
MMP3P08254 KLHL2P1-201ENST00000508691 521 ntBASIC3.49□□□□□ -1.85
MMP3P08254 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.49□□□□□ -1.85
MMP3P08254 RNU6-390P-201ENST00000516259 103 ntBASIC3.49□□□□□ -1.85
MMP3P08254 Y_RNA.693-201ENST00000516641 110 ntBASIC3.49□□□□□ -1.85
MMP3P08254 RNU6-410P-201ENST00000517006 107 ntBASIC3.49□□□□□ -1.85
MMP3P08254 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.49□□□□□ -1.85
MMP3P08254 HMGN1P28-201ENST00000521340 364 ntBASIC3.49□□□□□ -1.85
MMP3P08254 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.49□□□□□ -1.85
MMP3P08254 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MMP3P08254 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.49□□□□□ -1.85
MMP3P08254 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.49□□□□□ -1.85
MMP3P08254 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.49□□□□□ -1.85
MMP3P08254 AC034105.3-201ENST00000565294 442 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms