Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AC009901.1-201ENST00000506703 541 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AC034244.1-201ENST00000507687 207 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RNU4-29P-201ENST00000515943 174 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 RNU6-390P-201ENST00000516259 103 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 HMGN1P28-201ENST00000521340 364 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AP004247.1-201ENST00000531556 1289 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AC234778.2-201ENST00000566241 354 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AC010620.2-201ENST00000600135 313 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 MTND4LP5-201ENST00000605152 292 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AL136363.1-201ENST00000605349 337 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AC007038.2-201ENST00000608095 740 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AC068880.5-201ENST00000624331 290 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AL136313.1-201ENST00000624804 202 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 SCARNA15.3-201ENST00000626315 122 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 SCARNA4.1-201ENST00000628597 123 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 AC097655.1-201ENST00000635075 318 ntBASIC2.12□□□□□ -2.07
HLA-DPB1P04440 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HLA-DPB1P04440 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 RNU6-223P-201ENST00000362830 107 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 RNA5SP393-201ENST00000363423 117 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 Y_RNA.510-201ENST00000384511 114 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 ZNF863P-201ENST00000426746 417 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL035407.1-201ENST00000429211 571 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 RPL7P36-201ENST00000444633 681 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AC020550.1-201ENST00000447385 163 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 ANKRD26P4-201ENST00000455755 950 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 MTND4LP3-201ENST00000468320 276 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 CDC42P4-201ENST00000510507 563 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 MTCO1P47-201ENST00000523889 1271 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AC027176.1-201ENST00000560204 514 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AC025281.1-201ENST00000567026 265 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL354943.1-201ENST00000572103 781 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 RPL12P50-201ENST00000603116 116 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AC006023.1-201ENST00000603944 259 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL161729.4-201ENST00000604650 476 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AC091965.4-201ENST00000607691 587 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL355472.4-201ENST00000610233 626 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 FTX_3.1-201ENST00000610451 147 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AC099654.7-201ENST00000635788 2127 ntBASIC2.11□□□□□ -2.07
HLA-DPB1P04440 AC138915.1-201ENST00000565427 1685 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 SNORD56.5-201ENST00000364281 72 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 RNU6-660P-201ENST00000364566 109 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 Y_RNA.302-201ENST00000364997 102 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
HLA-DPB1P04440 FO393413.1-201ENST00000402892 195 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 AC078974.1-201ENST00000411597 223 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DPB1P04440 HMGB1P11-201ENST00000413899 637 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 VPS26BP1-201ENST00000417155 755 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 RPL22P18-201ENST00000417197 377 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DPB1P04440 BTF3L4P3-201ENST00000418879 476 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DPB1P04440 USP9YP26-201ENST00000421008 661 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 FCF1P1-201ENST00000432690 571 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DPB1P04440 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DPB1P04440 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DPB1P04440 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 AC005094.1-201ENST00000440420 368 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DPB1P04440 ELOCP30-201ENST00000447108 299 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 Z73417.1-201ENST00000447373 778 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DPB1P04440 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DPB1P04440 RPS3P1-201ENST00000456781 192 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 SNORD11.1-201ENST00000459482 85 ntBASIC2.1□□□□□ -2.07
HLA-DPB1P04440 OR5BM1P-201ENST00000512021 366 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms