Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ELOCP10-201ENST00000440624 327 ntBASIC0.48□□□□□ -2.33
APOBP04114 PSPHP1-201ENST00000450062 261 ntBASIC0.48□□□□□ -2.33
APOBP04114 RPL39P28-201ENST00000465655 155 ntBASIC0.48□□□□□ -2.33
APOBP04114 HMGB3P3-201ENST00000510526 400 ntBASIC0.48□□□□□ -2.33
APOBP04114 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.48□□□□□ -2.33
APOBP04114 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
APOBP04114 AC008269.2-201ENST00000561915 1105 ntBASIC0.48□□□□□ -2.33
APOBP04114 ELOCP34-201ENST00000604436 327 ntBASIC0.48□□□□□ -2.33
APOBP04114 AC009090.3-201ENST00000616553 565 ntBASIC0.48□□□□□ -2.33
APOBP04114 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
APOBP04114 AC104685.1-201ENST00000502445 371 ntBASIC0.47□□□□□ -2.33
APOBP04114 AC023141.11-201ENST00000508864 202 ntBASIC0.47□□□□□ -2.33
APOBP04114 TPT1P8-201ENST00000510120 555 ntBASIC0.47□□□□□ -2.33
APOBP04114 RNU6-928P-201ENST00000516876 104 ntBASIC0.47□□□□□ -2.33
APOBP04114 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.47□□□□□ -2.33
APOBP04114 AP000654.2-201ENST00000605633 586 ntBASIC0.47□□□□□ -2.33
APOBP04114 SDR42E1P2-201ENST00000614861 481 ntBASIC0.47□□□□□ -2.33
APOBP04114 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
APOBP04114 SDR42E1P4-201ENST00000620894 481 ntBASIC0.47□□□□□ -2.33
APOBP04114 AC008163.1-202ENST00000636004 2889 ntBASIC0.47□□□□□ -2.33
APOBP04114 U8.3-201ENST00000363321 132 ntBASIC0.47□□□□□ -2.33
APOBP04114 AC068050.1-201ENST00000394891 380 ntBASIC0.47□□□□□ -2.33
APOBP04114 NF1P3-201ENST00000457709 450 ntBASIC0.47□□□□□ -2.33
APOBP04114 AC010285.1-201ENST00000470580 392 ntBASIC0.47□□□□□ -2.33
APOBP04114 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.47□□□□□ -2.33
APOBP04114 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.47□□□□□ -2.33
APOBP04114 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.47□□□□□ -2.33
APOBP04114 MTCO3P24-201ENST00000572729 782 ntBASIC0.47□□□□□ -2.33
APOBP04114 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
APOBP04114 AC067863.3-201ENST00000624172 122 ntBASIC0.47□□□□□ -2.33
APOBP04114 RNY4P3-201ENST00000365254 95 ntBASIC0.47□□□□□ -2.33
APOBP04114 RNU4-72P-201ENST00000410754 173 ntBASIC0.47□□□□□ -2.33
APOBP04114 AC079780.1-201ENST00000428259 207 ntBASIC0.47□□□□□ -2.33
APOBP04114 AC093716.1-201ENST00000435923 377 ntBASIC0.47□□□□□ -2.33
APOBP04114 SNORA48.9-201ENST00000516419 162 ntBASIC0.47□□□□□ -2.33
APOBP04114 AC109809.1-201ENST00000619665 545 ntBASIC0.47□□□□□ -2.33
APOBP04114 AC068787.1-201ENST00000623908 691 ntBASIC0.47□□□□□ -2.33
APOBP04114 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
APOBP04114 SNRPEP3-201ENST00000338402 276 ntBASIC0.47□□□□□ -2.33
APOBP04114 SNORA7.2-201ENST00000364446 145 ntBASIC0.47□□□□□ -2.33
APOBP04114 SSXP10-201ENST00000402595 565 ntBASIC0.47□□□□□ -2.33
APOBP04114 AC000111.3-201ENST00000433478 193 ntBASIC0.47□□□□□ -2.33
APOBP04114 HMGN2P10-201ENST00000448085 265 ntBASIC0.47□□□□□ -2.33
APOBP04114 AC234775.1-201ENST00000454247 670 ntBASIC0.47□□□□□ -2.33
APOBP04114 HMGN1P10-201ENST00000474557 553 ntBASIC0.47□□□□□ -2.33
APOBP04114 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.47□□□□□ -2.33
APOBP04114 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.47□□□□□ -2.33
APOBP04114 AC133485.1-201ENST00000567176 124 ntBASIC0.47□□□□□ -2.33
APOBP04114 AC138907.6-201ENST00000568401 126 ntBASIC0.47□□□□□ -2.33
APOBP04114 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
APOBP04114 RNU6-1181P-201ENST00000384191 106 ntBASIC0.46□□□□□ -2.34
APOBP04114 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
APOBP04114 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.46□□□□□ -2.34
APOBP04114 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.46□□□□□ -2.34
APOBP04114 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.46□□□□□ -2.34
APOBP04114 AC112198.4-201ENST00000515450 351 ntBASIC0.46□□□□□ -2.34
APOBP04114 AL391261.3-201ENST00000557194 520 ntBASIC0.46□□□□□ -2.34
APOBP04114 AL138976.2-201ENST00000563989 694 ntBASIC0.46□□□□□ -2.34
APOBP04114 MIR3122-201ENST00000577243 73 ntBASIC0.46□□□□□ -2.34
APOBP04114 AC090616.5-202ENST00000582111 297 ntBASIC0.46□□□□□ -2.34
APOBP04114 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.46□□□□□ -2.34
APOBP04114 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
APOBP04114 AL356473.1-201ENST00000406203 1408 ntBASIC0.46□□□□□ -2.34
APOBP04114 FCF1P2-201ENST00000415284 583 ntBASIC0.46□□□□□ -2.34
APOBP04114 Z95118.1-201ENST00000421372 247 ntBASIC0.46□□□□□ -2.34
APOBP04114 AL591704.2-201ENST00000421658 181 ntBASIC0.46□□□□□ -2.34
APOBP04114 RPS29P28-201ENST00000446439 141 ntBASIC0.46□□□□□ -2.34
APOBP04114 AC098591.2-201ENST00000510152 315 ntBASIC0.46□□□□□ -2.34
APOBP04114 AC103810.9-201ENST00000606688 112 ntBASIC0.46□□□□□ -2.34
APOBP04114 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.46□□□□□ -2.34
APOBP04114 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.46□□□□□ -2.34
APOBP04114 SNORA2A-201ENST00000383885 135 ntBASIC0.46□□□□□ -2.34
APOBP04114 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.46□□□□□ -2.34
APOBP04114 AC027575.1-201ENST00000481064 460 ntBASIC0.46□□□□□ -2.34
APOBP04114 MTCO2P32-201ENST00000514865 403 ntBASIC0.46□□□□□ -2.34
APOBP04114 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
APOBP04114 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.46□□□□□ -2.34
APOBP04114 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
APOBP04114 MIR3690-201ENST00000580266 75 ntBASIC0.46□□□□□ -2.34
APOBP04114 HMGN1P30-201ENST00000589286 268 ntBASIC0.46□□□□□ -2.34
APOBP04114 AC013244.2-201ENST00000603396 103 ntBASIC0.46□□□□□ -2.34
APOBP04114 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
APOBP04114 RNA5SP511-201ENST00000410487 115 ntBASIC0.45□□□□□ -2.34
APOBP04114 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.45□□□□□ -2.34
APOBP04114 SDAD1P3-201ENST00000427380 333 ntBASIC0.45□□□□□ -2.34
APOBP04114 HMGB1P9-201ENST00000429856 646 ntBASIC0.45□□□□□ -2.34
APOBP04114 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.45□□□□□ -2.34
APOBP04114 CLIC4P1-201ENST00000453177 535 ntBASIC0.45□□□□□ -2.34
APOBP04114 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.45□□□□□ -2.34
APOBP04114 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
APOBP04114 OR5H4P-201ENST00000510851 923 ntBASIC0.45□□□□□ -2.34
APOBP04114 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.45□□□□□ -2.34
APOBP04114 AC022387.2-201ENST00000604050 448 ntBASIC0.45□□□□□ -2.34
APOBP04114 AC005034.5-201ENST00000604219 466 ntBASIC0.45□□□□□ -2.34
APOBP04114 AC068831.7-201ENST00000616954 363 ntBASIC0.45□□□□□ -2.34
APOBP04114 AC008555.8-201ENST00000623602 2168 ntBASIC0.45□□□□□ -2.34
APOBP04114 SNORA14A-201ENST00000364773 135 ntBASIC0.45□□□□□ -2.34
APOBP04114 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.45□□□□□ -2.34
APOBP04114 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.45□□□□□ -2.34
APOBP04114 RBM43P1-201ENST00000476891 1081 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms