Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PDGFAP04085 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.77□□□□□ -1.65
PDGFAP04085 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFAP04085 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PDGFAP04085 RNU6-708P-201ENST00000384217 107 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 SNORA12.2-201ENST00000391040 156 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 RPS29P13-201ENST00000402041 169 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 AC096920.1-201ENST00000423991 241 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFAP04085 MTCO3P29-201ENST00000432119 779 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 AC124916.1-201ENST00000444020 547 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 AC009237.8-201ENST00000445492 379 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFAP04085 AC022795.1-201ENST00000473808 480 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 AC067942.3-201ENST00000512025 362 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 FTH1P9-201ENST00000513251 355 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 Y_RNA.706-201ENST00000516933 99 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 RN7SL290P-201ENST00000578661 300 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFAP04085 AL139124.1-201ENST00000609123 421 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 SCARNA4-202ENST00000625402 129 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 U4.7-201ENST00000638126 106 ntBASIC4.77□□□□□ -1.65
PDGFAP04085 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFAP04085 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.77□□□□□ -1.65
PDGFAP04085 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.77□□□□□ -1.65
PDGFAP04085 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.77□□□□□ -1.65
PDGFAP04085 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFAP04085 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
PDGFAP04085 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFAP04085 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFAP04085 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFAP04085 AC007785.2-201ENST00000598627 1916 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFAP04085 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFAP04085 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PDGFAP04085 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFAP04085 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFAP04085 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PDGFAP04085 Y_RNA.123-201ENST00000363338 102 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 RNA5SP90-201ENST00000364801 99 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 SNORD56.6-201ENST00000384569 71 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFAP04085 RNU2-25P-201ENST00000411041 191 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 RNU6-130P-201ENST00000411112 103 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 RPL21P38-201ENST00000418090 167 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 SUMO1P3-201ENST00000439961 304 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 Z82210.1-201ENST00000440037 231 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.76□□□□□ -1.65
PDGFAP04085 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.76□□□□□ -1.65
PDGFAP04085 AL590664.1-201ENST00000448065 339 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PDGFAP04085 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFAP04085 AC140172.1-201ENST00000502928 141 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 RNU7-175P-201ENST00000515915 61 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 MIR2355-201ENST00000517199 87 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFAP04085 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFAP04085 AL442163.3-201ENST00000554110 156 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 AC012433.1-201ENST00000588916 398 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFAP04085 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 AP001273.1-201ENST00000624493 3152 ntBASIC4.76□□□□□ -1.65
PDGFAP04085 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PDGFAP04085 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFAP04085 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFAP04085 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFAP04085 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFAP04085 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFAP04085 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.75□□□□□ -1.65
PDGFAP04085 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFAP04085 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFAP04085 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PDGFAP04085 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFAP04085 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFAP04085 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFAP04085 Y_RNA.105-201ENST00000363182 111 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 Y_RNA.117-201ENST00000363294 101 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 SNORA7.2-201ENST00000364446 145 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 RNU6-336P-201ENST00000364891 107 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 Y_RNA.358-201ENST00000365491 99 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 Y_RNA.405-201ENST00000383979 100 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 Y_RNA.451-201ENST00000384200 100 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 Y_RNA.458-201ENST00000384240 102 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 Y_RNA.524-201ENST00000384564 100 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 Y_RNA.561-201ENST00000384694 100 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PDGFAP04085 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PDGFAP04085 RNU6-121P-201ENST00000410525 99 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 RAC1P3-201ENST00000416129 580 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFAP04085 RPL17P36-201ENST00000420302 549 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 NDUFB4P8-201ENST00000435351 367 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFAP04085 SNRPEP9-201ENST00000436794 238 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.75□□□□□ -1.65
PDGFAP04085 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFAP04085 AC112498.1-201ENST00000444401 332 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 LINC02210-201ENST00000444561 288 ntBASIC4.75□□□□□ -1.65
PDGFAP04085 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms