Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.75□□□□□ -1.49
ACTN4O43707 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ACTN4O43707 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ACTN4O43707 RNU4-84P-201ENST00000364200 139 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 RNU2-52P-201ENST00000410680 190 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 AC108075.1-201ENST00000424692 529 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 BX323845.1-201ENST00000432417 179 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.75□□□□□ -1.49
ACTN4O43707 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.75□□□□□ -1.49
ACTN4O43707 SNORA72.7-201ENST00000516349 94 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 AP006245.2-201ENST00000522004 300 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.75□□□□□ -1.49
ACTN4O43707 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.75□□□□□ -1.49
ACTN4O43707 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.75□□□□□ -1.49
ACTN4O43707 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.75□□□□□ -1.49
ACTN4O43707 AL133393.1-201ENST00000603277 287 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.75□□□□□ -1.49
ACTN4O43707 AC006001.4-201ENST00000622243 395 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 AC090617.7-201ENST00000623952 126 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
ACTN4O43707 AL596275.2-206ENST00000641957 626 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ACTN4O43707 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ACTN4O43707 AL022322.2-201ENST00000624072 20397 ntBASIC5.75□□□□□ -1.49
ACTN4O43707 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.75□□□□□ -1.49
ACTN4O43707 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ACTN4O43707 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.75□□□□□ -1.49
ACTN4O43707 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
ACTN4O43707 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
ACTN4O43707 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ACTN4O43707 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.74□□□□□ -1.49
ACTN4O43707 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ACTN4O43707 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.74□□□□□ -1.49
ACTN4O43707 RNU6-626P-201ENST00000363354 107 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 SNORA2.3-201ENST00000383920 135 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 RNU6-17P-201ENST00000384245 107 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 RNU6-18P-201ENST00000384527 107 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 RNU2-50P-201ENST00000410494 143 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.74□□□□□ -1.49
ACTN4O43707 AC009296.1-201ENST00000443146 155 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 AC087588.1-201ENST00000462203 316 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 AC108043.1-201ENST00000512696 574 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 RNU6-971P-201ENST00000516920 106 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.74□□□□□ -1.49
ACTN4O43707 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.74□□□□□ -1.49
ACTN4O43707 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
ACTN4O43707 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.74□□□□□ -1.49
ACTN4O43707 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.74□□□□□ -1.49
ACTN4O43707 AC010928.2-201ENST00000588017 287 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 FKBP1AP1-201ENST00000594588 318 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 AC023043.4-201ENST00000612081 449 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.74□□□□□ -1.49
ACTN4O43707 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ACTN4O43707 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ACTN4O43707 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
ACTN4O43707 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
ACTN4O43707 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ACTN4O43707 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.74□□□□□ -1.49
ACTN4O43707 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
ACTN4O43707 AL079305.1-201ENST00000623159 3008 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.74□□□□□ -1.49
ACTN4O43707 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.74□□□□□ -1.49
ACTN4O43707 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ACTN4O43707 AC009229.4-201ENST00000623854 1947 ntBASIC5.74□□□□□ -1.49
ACTN4O43707 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ACTN4O43707 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ACTN4O43707 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.73□□□□□ -1.49
ACTN4O43707 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ACTN4O43707 LINC01109-201ENST00000603837 3081 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 RNU6-1298P-201ENST00000362456 101 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 SNORD14B-201ENST00000364533 90 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 RNU6-818P-201ENST00000364837 108 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 Y_RNA.570-201ENST00000384750 101 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 BTF3L4P2-201ENST00000392798 346 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 UBA52P6-201ENST00000399822 382 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 AC007738.1-201ENST00000413892 348 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 AP000907.1-201ENST00000428428 510 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 COX6CP13-201ENST00000428703 226 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 RPL35AP21-201ENST00000437667 333 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.73□□□□□ -1.49
ACTN4O43707 AC005840.1-201ENST00000498412 377 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 HMGB3P3-201ENST00000510526 400 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 RNU6-377P-201ENST00000515965 102 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
ACTN4O43707 MIR548X2-201ENST00000579776 100 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 MIR4496-201ENST00000635896 61 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
ACTN4O43707 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ACTN4O43707 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ACTN4O43707 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ACTN4O43707 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ACTN4O43707 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.73□□□□□ -1.49
ACTN4O43707 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.73□□□□□ -1.49
ACTN4O43707 AC063976.2-201ENST00000425667 3556 ntBASIC5.73□□□□□ -1.49
ACTN4O43707 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ACTN4O43707 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.72□□□□□ -1.49
ACTN4O43707 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ACTN4O43707 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms