Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.94□□□□□ -2.1
UPK1AO00322 MIR4658-201ENST00000584344 65 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AC002984.1-201ENST00000591692 448 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 BNIP3P26-201ENST00000600827 554 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AL356280.1-201ENST00000603614 379 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AC009314.1-201ENST00000603871 304 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 OR10AB1P-201ENST00000609613 938 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 SDR42E1P2-201ENST00000614861 481 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK1AO00322 AL356266.1-201ENST00000623311 483 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 AC064859.1-201ENST00000624741 174 ntBASIC1.94□□□□□ -2.1
UPK1AO00322 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
UPK1AO00322 ELF2P3-201ENST00000445099 1506 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
UPK1AO00322 SNORA64-201ENST00000384674 134 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 RNU6-754P-201ENST00000391166 107 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AL445529.1-201ENST00000398713 389 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK1AO00322 MIR888-201ENST00000401186 77 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AL590084.2-201ENST00000401481 382 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 RNA5SP425-201ENST00000410336 112 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 RNA5SP508-201ENST00000411327 119 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK1AO00322 AL451054.2-201ENST00000420896 202 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK1AO00322 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK1AO00322 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK1AO00322 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK1AO00322 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UPK1AO00322 RNU7-26P-201ENST00000458980 63 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 MTND1P16-201ENST00000465177 898 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 RPL9P6-201ENST00000492764 598 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
UPK1AO00322 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.93□□□□□ -2.1
UPK1AO00322 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK1AO00322 AC118465.1-201ENST00000513820 1271 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK1AO00322 RNU6-276P-201ENST00000516114 96 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AC010376.1-201ENST00000522101 334 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.93□□□□□ -2.1
UPK1AO00322 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK1AO00322 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK1AO00322 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK1AO00322 CYCSP2-201ENST00000558168 301 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 MIR4435-1-201ENST00000582552 80 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AF038458.1-201ENST00000588406 262 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK1AO00322 AL357094.1-201ENST00000603845 844 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK1AO00322 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK1AO00322 AL138478.1-201ENST00000612252 832 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 PART1_2.1-201ENST00000612397 250 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AL138955.1-201ENST00000622881 1040 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AC068057.2-201ENST00000624047 895 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 AC099063.3-201ENST00000642066 185 ntBASIC1.93□□□□□ -2.1
UPK1AO00322 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UPK1AO00322 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
UPK1AO00322 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UPK1AO00322 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
UPK1AO00322 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
UPK1AO00322 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
UPK1AO00322 RNU6-223P-201ENST00000362830 107 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 SNORA38-201ENST00000363946 132 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UPK1AO00322 RNU6-413P-201ENST00000384115 107 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 SNORA67.3-201ENST00000384366 140 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 SNORD116-12-201ENST00000384468 92 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 RNU6-1257P-201ENST00000384625 110 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 RPL23AP29-201ENST00000397284 453 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 RN7SKP32-201ENST00000410167 303 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 RN7SKP223-201ENST00000410582 62 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 RNU4-72P-201ENST00000410754 173 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 AC023141.4-201ENST00000412031 328 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.92□□□□□ -2.1
UPK1AO00322 UBE2FP1-201ENST00000416536 447 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 MTCYBP38-201ENST00000417160 1123 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1AO00322 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1AO00322 AP000949.1-201ENST00000438328 629 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 AC096638.1-201ENST00000444678 216 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 PAXBP1P1-201ENST00000449315 447 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 SNORA59A-201ENST00000459326 152 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 RPS29P20-201ENST00000489592 171 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 AL160314.1-201ENST00000490836 438 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1AO00322 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1AO00322 SCARNA17.1-201ENST00000516211 143 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 RNU6-390P-201ENST00000516259 103 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 SCARNA17.2-201ENST00000516334 143 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 RNA5SP290-201ENST00000517133 127 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 SCARNA11.3-201ENST00000517276 130 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1AO00322 MTND1P36-201ENST00000522384 936 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 IGKV3-31-201ENST00000523109 329 ntBASIC1.92□□□□□ -2.1
UPK1AO00322 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1AO00322 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.92□□□□□ -2.1
UPK1AO00322 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms