Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM1O00151 DUXAP5-201ENST00000529668 529 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 DEFB108A-201ENST00000530110 222 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.66□□□□□ -1.98
PDLIM1O00151 PRELID2P1-201ENST00000552837 301 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM1O00151 AC121758.2-201ENST00000553271 193 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 MTND3P12-201ENST00000559068 328 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
PDLIM1O00151 AL158211.1-201ENST00000566763 763 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 AL356432.3-201ENST00000568952 465 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 MIR5694-201ENST00000581190 76 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 AC008739.2-201ENST00000597006 317 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.66□□□□□ -1.98
PDLIM1O00151 AC245517.5-201ENST00000611529 162 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 MIR7844-201ENST00000616161 122 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 AC120349.3-201ENST00000624377 529 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.66□□□□□ -1.98
PDLIM1O00151 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM1O00151 AC110079.1-202ENST00000635213 138 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PDLIM1O00151 Z82195.2-201ENST00000612348 18351 ntBASIC2.66□□□□□ -1.98
PDLIM1O00151 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.65□□□□□ -1.98
PDLIM1O00151 Y_RNA.169-201ENST00000363745 96 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 RNU6-553P-201ENST00000364047 96 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 RNU6-741P-201ENST00000383889 107 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 RNU6-533P-201ENST00000384144 107 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 MIR128-1-201ENST00000384921 82 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 U3.37-201ENST00000408528 213 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AL513331.1-201ENST00000411908 397 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 BTF3L4P3-201ENST00000418879 476 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AL365203.2-201ENST00000423444 196 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.65□□□□□ -1.99
PDLIM1O00151 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM1O00151 RPL7P34-201ENST00000433316 712 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AL049734.2-201ENST00000441066 616 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.65□□□□□ -1.99
PDLIM1O00151 LARP1BP2-201ENST00000486594 519 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PDLIM1O00151 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PDLIM1O00151 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM1O00151 RPF2P2-201ENST00000504693 896 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AC010486.2-201ENST00000505572 483 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 MTND1P22-201ENST00000510572 951 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AC026407.1-201ENST00000518369 204 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.65□□□□□ -1.99
PDLIM1O00151 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM1O00151 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.65□□□□□ -1.99
PDLIM1O00151 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PDLIM1O00151 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PDLIM1O00151 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AC123904.2-201ENST00000548059 300 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 H3F3AP1-201ENST00000559984 334 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.65□□□□□ -1.99
PDLIM1O00151 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM1O00151 AC027807.2-201ENST00000616099 408 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AL603755.1-201ENST00000619504 163 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AC073308.1-201ENST00000623696 305 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 CR381653.2-201ENST00000624041 768 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.65□□□□□ -1.99
PDLIM1O00151 AC010149.2-201ENST00000637608 315 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 AC092593.1-201ENST00000515413 1815 ntBASIC2.65□□□□□ -1.99
PDLIM1O00151 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
PDLIM1O00151 AL139276.1-201ENST00000311910 1001 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 RNU5F-6P-201ENST00000362979 116 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 RNU1-140P-201ENST00000365040 165 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PDLIM1O00151 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.64□□□□□ -1.99
PDLIM1O00151 AL031577.2-201ENST00000404133 280 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 Z85995.1-201ENST00000415547 335 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.64□□□□□ -1.99
PDLIM1O00151 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.64□□□□□ -1.99
PDLIM1O00151 RPS6P15-201ENST00000431996 751 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.64□□□□□ -1.99
PDLIM1O00151 TIMM9P1-201ENST00000436122 256 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 MTND1P30-201ENST00000441241 901 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 DDX3P2-201ENST00000446138 111 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.64□□□□□ -1.99
PDLIM1O00151 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.64□□□□□ -1.99
PDLIM1O00151 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.64□□□□□ -1.99
PDLIM1O00151 AL135752.1-201ENST00000479477 471 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.64□□□□□ -1.99
PDLIM1O00151 AC112204.1-201ENST00000502591 103 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.64□□□□□ -1.99
PDLIM1O00151 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.64□□□□□ -1.99
PDLIM1O00151 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.64□□□□□ -1.99
PDLIM1O00151 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.64□□□□□ -1.99
PDLIM1O00151 RN7SKP40-201ENST00000517211 242 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PDLIM1O00151 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.64□□□□□ -1.99
PDLIM1O00151 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.64□□□□□ -1.99
PDLIM1O00151 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.64□□□□□ -1.99
PDLIM1O00151 HMGB1P6-201ENST00000569046 646 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 AC010620.2-201ENST00000600135 313 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 KC877982.1-201ENST00000602313 470 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 WISP1-OT1-201ENST00000602893 642 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 AL035413.2-201ENST00000604801 525 ntBASIC2.64□□□□□ -1.99
PDLIM1O00151 AC008277.2-201ENST00000605196 797 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms