Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AL592148.2-201ENST00000612210 372 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 CR381572.1-201ENST00000625098 102 ntBASIC0.75□□□□□ -2.29
CPSF4LA6NMK7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 RNU6-1249P-201ENST00000363237 111 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 RNU6-270P-201ENST00000364131 105 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 RNU6-392P-201ENST00000364926 101 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 RNU6-185P-201ENST00000384421 107 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 RN7SKP158-201ENST00000410453 326 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 RPL39P28-201ENST00000465655 155 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 OR2A41P-201ENST00000473586 105 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 RNU6-991P-201ENST00000516168 107 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 RN7SKP265-201ENST00000516448 223 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 SNORA48.10-201ENST00000516965 160 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AP000907.2-201ENST00000530827 353 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 MED28P6-201ENST00000558776 231 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AP001004.1-201ENST00000582468 324 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AL133370.2-201ENST00000619934 439 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 AL133216.2-202ENST00000634512 349 ntBASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.74□□□□□ -2.29
CPSF4LA6NMK7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 RNU6-989P-201ENST00000362756 107 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 RNU6-1080P-201ENST00000383982 107 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 MT-TC-201ENST00000387405 66 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 SNORD65-201ENST00000391079 73 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 TPTE2P6-202ENST00000445572 1007 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 RPL12P25-201ENST00000455592 494 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 SUMO2P2-201ENST00000456482 255 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 HMGN1P7-201ENST00000491722 313 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 AC114801.2-201ENST00000503825 781 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 AC021087.2-201ENST00000504656 1203 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 AC103851.1-201ENST00000506833 274 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 RNU6-319P-201ENST00000516025 108 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 SNORA31.16-201ENST00000516773 139 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 AP002748.2-201ENST00000528671 348 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 MIR6857-201ENST00000613267 93 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 AP002791.1-201ENST00000623291 381 ntBASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.73□□□□□ -2.29
CPSF4LA6NMK7 NSRP1P1-201ENST00000444067 1693 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 RNA5SP125-201ENST00000364843 120 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 RN7SKP61-201ENST00000410642 295 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 RPS15AP12-201ENST00000419498 388 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 TRIM60P13-201ENST00000432350 1283 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 RPL39P29-201ENST00000447779 157 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 MTND4LP3-201ENST00000468320 276 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AC008837.2-201ENST00000513076 418 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 SNORA70.16-201ENST00000516390 95 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 SCARNA11.3-201ENST00000517276 130 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AC010186.2-204ENST00000537668 439 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 AC016925.2-201ENST00000605108 242 ntBASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CPSF4LA6NMK7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms