Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC007785.2-201ENST00000598627 1916 ntBASIC3.34□□□□□ -1.88
LRRC53A6NM62 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.34□□□□□ -1.88
LRRC53A6NM62 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC53A6NM62 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC53A6NM62 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC53A6NM62 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC073343.1-201ENST00000328239 651 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 RNU6-946P-201ENST00000383878 107 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 RNU6-641P-201ENST00000384006 107 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 RNU6-456P-201ENST00000384493 107 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 PTMAP2-201ENST00000397627 327 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 RPS4XP3-201ENST00000398541 413 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC53A6NM62 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC53A6NM62 AL159987.2-201ENST00000432754 307 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 DNAJC19P4-201ENST00000440115 345 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 CYCSP35-201ENST00000451978 304 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC013267.1-201ENST00000458227 267 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC007182.2-201ENST00000489251 402 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC010265.1-201ENST00000513509 211 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 RNA5SP471-201ENST00000516971 106 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 RNA5SP380-201ENST00000517190 98 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 AP003072.2-201ENST00000527756 676 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.33□□□□□ -1.88
LRRC53A6NM62 NCAPGP2-201ENST00000557911 754 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC034105.4-201ENST00000568304 277 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC087241.4-201ENST00000612441 480 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC068831.7-201ENST00000616954 363 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC002076.2-201ENST00000617362 122 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 AC098679.4-201ENST00000624241 654 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.33□□□□□ -1.88
LRRC53A6NM62 OR5AK4P-201ENST00000635912 903 ntBASIC3.33□□□□□ -1.88
LRRC53A6NM62 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC53A6NM62 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC53A6NM62 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 RNU6-288P-201ENST00000363690 104 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 RNU6-108P-201ENST00000365558 107 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 RNU6-741P-201ENST00000383889 107 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 MIR1-2-201ENST00000384961 85 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 SNORD67-201ENST00000390833 111 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 RNU2-39P-201ENST00000410604 198 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 SDCBPP3-201ENST00000419629 891 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC53A6NM62 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 AC097713.2-201ENST00000430199 356 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 MTATP6P16-201ENST00000434543 526 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 RPS20P5-201ENST00000434808 360 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 SNRPEP4-201ENST00000435815 279 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 RPS15AP9-201ENST00000439856 381 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 AC110794.1-201ENST00000505816 425 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 SAP18P1-201ENST00000512058 390 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 RN7SKP43-201ENST00000516173 320 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 RNU6-720P-201ENST00000516363 108 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 RNU6-410P-201ENST00000517006 107 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 FAM92A1P1-201ENST00000528023 890 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 OR5B19P-201ENST00000531766 928 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 SUB1P2-201ENST00000556401 297 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 TRAV28-201ENST00000557548 323 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 AC010546.1-201ENST00000569391 485 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 AL109618.2-201ENST00000605527 211 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 AC034102.8-201ENST00000615146 484 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 AC007998.5-201ENST00000622938 237 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 OR5H6-203ENST00000642105 978 ntBASIC3.32□□□□□ -1.88
LRRC53A6NM62 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC53A6NM62 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRC53A6NM62 AL079305.1-201ENST00000623159 3008 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC53A6NM62 MTND5P19-201ENST00000424872 1794 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 AC073325.2-201ENST00000339545 159 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC53A6NM62 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC53A6NM62 Y_RNA.3-201ENST00000362331 103 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 RNU6-1097P-201ENST00000363586 107 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC53A6NM62 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 RNU6-74P-201ENST00000384235 107 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 RNU2-33P-201ENST00000410344 192 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 RPL23AP69-201ENST00000431134 458 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 AL512844.2-201ENST00000433990 593 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 BNIP3P2-201ENST00000441221 577 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms