Protein–RNA interactions for Protein: A6NFI3

ZNF316, Zinc finger protein 316, humanhuman

Predicted RBP Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF316A6NFI3 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.82-201ENST00000363000 102 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.92-201ENST00000363043 102 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.235-201ENST00000364412 102 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.306-201ENST00000365015 102 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.308-201ENST00000365043 101 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.312-201ENST00000365089 102 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.322-201ENST00000365151 102 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 RNU6-80P-201ENST00000384195 107 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 SNORA40-201ENST00000388090 126 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.650-201ENST00000459002 102 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 HMGB1P25-201ENST00000468402 607 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.686-201ENST00000516548 134 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 RNU6-971P-201ENST00000516920 106 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.777-201ENST00000516982 102 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 AC069113.1-201ENST00000517763 267 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 AC022790.1-201ENST00000522872 204 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 MIR3614-201ENST00000581261 86 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.771-201ENST00000598668 102 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 AC006329.2-201ENST00000611491 394 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 Y_RNA.789-201ENST00000622480 102 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 NEAT1-202ENST00000501122 22743 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.91□□□□□ -1.3
ZNF316A6NFI3 AL445487.1-201ENST00000415694 1580 ntBASIC6.91□□□□□ -1.3
ZNF316A6NFI3 SMG1P6-201ENST00000532337 2930 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 RNU6-595P-201ENST00000363944 107 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 MIR569-201ENST00000385228 96 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AL357075.1-201ENST00000404107 726 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 DUTP5-201ENST00000406790 469 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 TOMM20P4-201ENST00000427861 435 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AC008065.1-201ENST00000428525 348 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 PTMAP6-201ENST00000439110 327 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AL137159.1-201ENST00000452808 512 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 RN7SL817P-201ENST00000480777 288 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 RPS21P4-201ENST00000487122 248 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 RNA5SP228-201ENST00000516232 133 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 RNA5SP43-201ENST00000516559 110 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AP002001.1-203ENST00000534002 267 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AC120057.2-201ENST00000571520 271 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AC209154.1-201ENST00000582156 337 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AC037487.3-201ENST00000606668 112 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AC091979.2-201ENST00000607514 214 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 TUG1_2.1-201ENST00000614234 87 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC6.9□□□□□ -1.3
ZNF316A6NFI3 AC007998.5-201ENST00000622938 237 ntBASIC6.9□□□□□ -1.3
ZNF316A6NFI3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ZNF316A6NFI3 AC233981.2-201ENST00000611524 1614 ntBASIC6.9□□□□□ -1.31
ZNF316A6NFI3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ZNF316A6NFI3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ZNF316A6NFI3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 Y_RNA.275-201ENST00000364726 110 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 RNU6-1056P-201ENST00000383996 107 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 Y_RNA.480-201ENST00000384364 102 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 RNU6-933P-201ENST00000384424 107 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 MT-TC-201ENST00000387405 66 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 TBCAP2-201ENST00000416175 326 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 RPL30P3-201ENST00000424262 333 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 PTGES3P4-201ENST00000426243 356 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 RPL31P60-201ENST00000478450 367 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 RN7SL558P-201ENST00000497468 299 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 IGKV2D-36-201ENST00000518643 226 ntBASIC6.89□□□□□ -1.31
ZNF316A6NFI3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.89□□□□□ -1.31
ZNF316A6NFI3 AC093249.4-201ENST00000564755 259 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms