Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 MIR4703-201ENST00000577728 79 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AP001029.3-201ENST00000588063 596 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC060780.3-201ENST00000589464 80 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 U6.42-201ENST00000618440 107 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AP003122.6-201ENST00000623831 495 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 U6.114-201ENST00000636407 96 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 MIR3662-201ENST00000637030 95 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 MTND5P42-201ENST00000637720 498 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC024614.3-201ENST00000637860 256 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC009093.8-201ENST00000641769 292 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 RNU1-70P-201ENST00000362618 164 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 MIR1193-201ENST00000408109 78 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6-1068P-201ENST00000410958 103 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 RPL30P16-201ENST00000419341 429 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 MTCYBP8-201ENST00000422855 651 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 AL356867.1-201ENST00000429623 299 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 RPL21P133-201ENST00000443666 476 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 AL118520.1-201ENST00000450770 291 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 RPL23AP67-201ENST00000465341 474 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 AL049874.1-201ENST00000489560 388 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 RNA5SP468-201ENST00000516782 93 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 IGKV2D-19-201ENST00000523346 262 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 AF235103.2-201ENST00000525753 346 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 AP005205.1-201ENST00000563503 508 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 MIR548S-201ENST00000581352 82 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 MIR4697-201ENST00000582977 78 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 AC008521.1-201ENST00000587471 187 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 DPPA3P3-201ENST00000603842 430 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 RMST_3.1-201ENST00000611651 109 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 AC034102.8-201ENST00000615146 484 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 AC090132.2-201ENST00000615881 347 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 OR4G2P-202ENST00000641004 1759 ntBASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.42□□□□□ -1.86
TCRBV7S3A2A0A539 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6-552P-201ENST00000362869 119 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AL139397.2-201ENST00000404529 772 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6-193P-201ENST00000410977 107 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 OR9R1P-201ENST00000412200 877 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 CALM2P2-201ENST00000428512 440 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 RBMY2UP-201ENST00000453474 324 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 SNRPGP5-201ENST00000456003 220 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6-953P-201ENST00000459154 107 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 RPL23AP14-201ENST00000468281 468 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AC106707.2-201ENST00000484182 374 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 RPL38P4-201ENST00000502376 214 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AC117522.3-201ENST00000507974 584 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 RNU1-143P-201ENST00000516296 146 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 SUB1P1-201ENST00000524415 382 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 AC004024.1-201ENST00000549244 247 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 HIF1AP1-201ENST00000553642 175 ntBASIC3.41□□□□□ -1.86
TCRBV7S3A2A0A539 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms