Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC163A0A0D9SF12 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC163A0A0D9SF12 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC163A0A0D9SF12 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC163A0A0D9SF12 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC163A0A0D9SF12 RLIMP1-201ENST00000339626 1680 ntBASIC4.31□□□□□ -1.72
CCDC163A0A0D9SF12 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC163A0A0D9SF12 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC163A0A0D9SF12 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC163A0A0D9SF12 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC163A0A0D9SF12 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC163A0A0D9SF12 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 RNU6-266P-201ENST00000364225 107 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 Y_RNA.387-201ENST00000383918 102 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 Y_RNA.474-201ENST00000384341 102 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 RPL7P10-201ENST00000417407 739 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 EIF4EP1-201ENST00000422311 642 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AL133547.1-201ENST00000448546 220 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 RPS27P27-201ENST00000498779 255 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 RNU6-559P-201ENST00000516151 98 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 RNU6-1069P-201ENST00000516612 133 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 RNA5SP165-201ENST00000517142 115 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 RNA5SP454-201ENST00000517231 127 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 CYCSP27-201ENST00000527643 293 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AL670379.10-201ENST00000604330 253 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 APOOP1-201ENST00000604695 592 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AL670379.9-201ENST00000605428 253 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 AC016727.1-205ENST00000605437 569 ntBASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC163A0A0D9SF12 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC138393.1-203ENST00000327086 343 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 RNU6-395P-201ENST00000365662 106 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 SNORD116-11-201ENST00000383882 92 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 RPL23AP25-201ENST00000430973 463 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC236972.2-201ENST00000434979 310 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 RPS3AP52-201ENST00000435639 297 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC022493.1-201ENST00000492984 337 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC139453.3-201ENST00000493276 369 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC008716.1-201ENST00000511084 513 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 TRAV28-201ENST00000557548 323 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 FRG2DP-202ENST00000566967 323 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC007151.1-201ENST00000572774 483 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC044792.1-201ENST00000593294 196 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC004805.2-201ENST00000605382 482 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AL050343.2-201ENST00000607338 280 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 AC039056.2-201ENST00000622261 511 ntBASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC163A0A0D9SF12 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 SNORA71.3-201ENST00000362582 128 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 RNU1-20P-201ENST00000363314 162 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 Y_RNA.212-201ENST00000364177 102 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 Y_RNA.480-201ENST00000384364 102 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 MIR921-201ENST00000401133 56 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 U3.42-201ENST00000408746 214 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 RNA5SP36-201ENST00000410197 133 ntBASIC4.28□□□□□ -1.72
CCDC163A0A0D9SF12 SNORA74C-2-201ENST00000411179 201 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms