Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 BOLA3P4-201ENST00000418151 400 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 MED14P1-201ENST00000430517 648 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 AL512637.2-201ENST00000431287 1256 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 MTND2P29-201ENST00000438595 412 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 PTENP1-201ENST00000447117 1215 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 SCARNA15.2-201ENST00000516409 127 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 RNU1-103P-201ENST00000516502 125 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 SNORA31.24-201ENST00000517232 57 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 AC027309.2-201ENST00000520566 192 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 DUXAP5-201ENST00000529668 529 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 SNORD53B-201ENST00000577887 78 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 AC103710.2-201ENST00000609912 942 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.91□□□□□ -2.26
TRAV13-2A0A0B4J235 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 RNU4-82P-201ENST00000362443 140 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 RNU5A-1-201ENST00000362698 116 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 SNORD26-201ENST00000384147 75 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 SNORA40.19-201ENST00000390846 128 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 SNORA40.18-201ENST00000391200 128 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 SNORA11.1-201ENST00000408133 129 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 RNU2-63P-201ENST00000410792 194 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AC233981.1-201ENST00000423224 461 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 PNRC2P1-201ENST00000423940 420 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AL354695.1-201ENST00000427935 228 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 Z82210.1-201ENST00000440037 231 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 HMGN2P23-201ENST00000456759 269 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 RPL26P9-201ENST00000457466 433 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AC069306.1-201ENST00000507006 843 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 MRPS33P3-201ENST00000513456 322 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AC007151.1-201ENST00000572774 483 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 MIR4648-201ENST00000580107 72 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AC079610.2-201ENST00000604818 690 ntBASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.9□□□□□ -2.27
TRAV13-2A0A0B4J235 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 MIR424-201ENST00000362227 98 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 MIR514A1-201ENST00000385133 98 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 SNORA67.6-201ENST00000391093 99 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 SFR1P2-201ENST00000421841 730 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 EIF4EP2-201ENST00000422816 654 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 SSXP1-201ENST00000453640 473 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AC008379.1-201ENST00000463655 464 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 SNORA4.4-201ENST00000515921 135 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 MIR4765-201ENST00000585007 77 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AC021755.4-201ENST00000616620 456 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AP003476.1-201ENST00000623984 516 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 AC010149.2-201ENST00000637608 315 ntBASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV13-2A0A0B4J235 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 SNORA3.2-201ENST00000408221 125 ntBASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 RNU2-47P-201ENST00000410649 186 ntBASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 BEND7P1-201ENST00000422058 457 ntBASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 THAP5P1-201ENST00000439089 262 ntBASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV13-2A0A0B4J235 RFC5P1-201ENST00000454419 874 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms