Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNU6-1078P-201ENST00000364522 103 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
USH1CQ9Y6N9 RNU1-39P-201ENST00000383897 165 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 SNORA70B-201ENST00000384210 135 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 SNORA46.1-201ENST00000391069 153 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 RNU2-33P-201ENST00000410344 192 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2□□□□□ -2.09
USH1CQ9Y6N9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2□□□□□ -2.09
USH1CQ9Y6N9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2□□□□□ -2.09
USH1CQ9Y6N9 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2□□□□□ -2.09
USH1CQ9Y6N9 AC096571.1-202ENST00000506634 735 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 AC023141.11-201ENST00000508864 202 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 AC008837.1-201ENST00000511513 412 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 AC022447.1-201ENST00000515358 464 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 HMGN1P28-201ENST00000521340 364 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2□□□□□ -2.09
USH1CQ9Y6N9 AP003122.3-201ENST00000526316 255 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2□□□□□ -2.09
USH1CQ9Y6N9 AL049838.1-201ENST00000563647 981 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2□□□□□ -2.09
USH1CQ9Y6N9 AC136601.2-201ENST00000604356 474 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 AL512506.1-201ENST00000613918 449 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2□□□□□ -2.09
USH1CQ9Y6N9 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
USH1CQ9Y6N9 AL354685.2-201ENST00000448218 1447 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 AC004520.1-201ENST00000608362 1413 ntBASIC2□□□□□ -2.09
USH1CQ9Y6N9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 RNA5SP289-201ENST00000362332 137 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 SNORA23-201ENST00000365128 182 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 RNU6-637P-201ENST00000384050 107 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 RNU6-750P-201ENST00000390946 107 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 RPL23AP29-201ENST00000397284 453 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 MIR888-201ENST00000401186 77 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AL135786.1-201ENST00000415892 214 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 MTATP6P7-201ENST00000453315 681 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 ATG12P2-201ENST00000456830 416 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 SNORD121B-201ENST00000458838 81 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 RPS20P22-201ENST00000473700 357 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 HMGB1P28-201ENST00000507778 552 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AC098591.2-201ENST00000510152 315 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 NRON-201ENST00000517270 370 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 SLC2A13P1-201ENST00000531560 322 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AC002545.1-201ENST00000592511 181 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 DNAJC19P3-201ENST00000594491 331 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AC025588.2-201ENST00000604851 466 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AC006927.2-201ENST00000639256 389 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 AC010329.5-201ENST00000623497 2174 ntBASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.99□□□□□ -2.09
USH1CQ9Y6N9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 MTND5P6-201ENST00000422338 1798 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 RNU5B-4P-201ENST00000363508 111 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 XGY1-201ENST00000381172 446 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 RNU6-1122P-201ENST00000384449 107 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 BTF3P7-201ENST00000407097 488 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 TPMTP2-201ENST00000414372 726 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 NPM1P11-201ENST00000417106 855 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 BX119904.4-201ENST00000424402 301 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AC027124.2-201ENST00000428249 105 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 MTND2P20-201ENST00000440805 661 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 OSTCP8-201ENST00000445117 448 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AL121769.1-201ENST00000469473 401 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 RPL23AP41-201ENST00000484754 458 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 RNU6-714P-201ENST00000516963 103 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AP005902.1-201ENST00000521358 186 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AP003049.1-201ENST00000529418 457 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 HIGD1AP17-201ENST00000554576 276 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AP000403.1-201ENST00000603349 851 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AC012493.3-201ENST00000604494 112 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AC069304.2-201ENST00000605154 435 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AC120053.1-201ENST00000607706 736 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AC006020.1-201ENST00000420179 1854 ntBASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USH1CQ9Y6N9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 RNU6-236P-201ENST00000363886 106 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 RNU1-91P-201ENST00000364746 163 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 SNORD23.1-201ENST00000408212 104 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 RNU4-53P-201ENST00000410828 140 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms