Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC109925.1-201ENST00000478069 331 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 RPL7P47-201ENST00000497299 556 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AC069307.1-201ENST00000602820 447 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AC108738.1-201ENST00000603703 237 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AC099669.2-201ENST00000616549 437 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AL022322.2-201ENST00000624072 20397 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 MIR613-201ENST00000385248 95 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 SNORA48.4-201ENST00000391089 134 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 DUTP5-201ENST00000406790 469 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 OR2AH1P-201ENST00000425717 928 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AP000907.1-201ENST00000428428 510 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 MLLT10P2-201ENST00000506434 249 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AC098976.1-201ENST00000513014 541 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AC010265.1-201ENST00000513509 211 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 RNA5SP290-201ENST00000517133 127 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AC107918.3-201ENST00000533272 382 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AC092490.3-201ENST00000545370 572 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AL359219.2-201ENST00000555184 348 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AL162424.1-201ENST00000602325 221 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 BRDTP1-201ENST00000605735 677 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AC131238.1-201ENST00000617135 328 ntBASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB11Q9Y5F2 AC092376.2-201ENST00000622621 4116 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 RNU6-222P-201ENST00000362438 107 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 SNORA17.1-201ENST00000362945 126 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 RNU6-47P-201ENST00000383866 107 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 BTF3L4P2-201ENST00000392798 346 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 AC007560.1-201ENST00000426912 237 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 AC010326.1-201ENST00000462726 602 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 AC108145.1-201ENST00000503770 153 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 SNORD116-28-201ENST00000516123 91 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 RNU6-1256P-201ENST00000516539 103 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 SNORA31.18-201ENST00000517043 134 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 AC010928.2-201ENST00000588017 287 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 SNORD113-5-201ENST00000607261 78 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 SCARNA4-201ENST00000629045 128 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 SAMMSON-213ENST00000641336 1521 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 AC010266.2-201ENST00000564741 3255 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 AC090740.1-201ENST00000623193 2262 ntBASIC5.16□□□□□ -1.58
PCDHB11Q9Y5F2 AC233981.2-201ENST00000611524 1614 ntBASIC5.15□□□□□ -1.58
PCDHB11Q9Y5F2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHB11Q9Y5F2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHB11Q9Y5F2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PCDHB11Q9Y5F2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHB11Q9Y5F2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
PCDHB11Q9Y5F2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHB11Q9Y5F2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
PCDHB11Q9Y5F2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHB11Q9Y5F2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms